Cutibacterium acnes hdn-1: TIA1EST1_00050
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Entry
TIA1EST1_00050 CDS
T03470
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pacn
Cutibacterium acnes hdn-1
Brite
KEGG Orthology (KO) [BR:
pacn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pacn03032
]
TIA1EST1_00050
03400 DNA repair and recombination proteins [BR:
pacn03400
]
TIA1EST1_00050
Enzymes [BR:
pacn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TIA1EST1_00050
DNA replication proteins [BR:
pacn03032
]
Prokaryotic type
DNA Topoisomerases
TIA1EST1_00050
DNA repair and recombination proteins [BR:
pacn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TIA1EST1_00050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AID35031
LinkDB
All DBs
Position
11703..14378
Genome browser
AA seq
891 aa
AA seq
DB search
MADDEKPDEQNQADRQGLVTGRHVGIQPVEIRDEIQNAYLDYAMSVIVGRALPDVRDGLK
PVHRRVIYAMYDGGYRPDRGWNKCSRVVGDVMGKYHPHGDSAIYDTLVRLAQPWAMRYKL
VQGQGNFGSQGNDGAAAMRYTECKMAPLAMEMVRDIDQDTVDFQPNYDNKETEPVVLPSR
FPNLLVNGSSGIAVGMATNIPTHNLREVNEAVQWSLAHPNASHEELLEACMERIKGPDFP
GGALIVGRQGIEDAYRTGRGSVTMRAVIDMEEDKKGRQCLVVTELPYMCNPDNLATKIAD
LVNSGRINGIADIRDDSSARTGQRLVIVLKRDAQPRVVMNNLYKHTALQDTFGCNMLALV
DNVPRTLRLDQFISYWIDHQMEVIRRRTEYRLAQAEKDAHIQRALVKALDMLDEVIALIR
RSPNTEAASTGLQELLDIDEIQARAILDMQLRRLAALERQKIIDRLEELERLIADYKAIL
ASEDRQREIISTELAEIVDKYGDERRTRIIAADGDFSEEDFIPDDDVVVTITRGGYAKRT
RTDLYRVQKRGGKGVRGASLRADDEVAQLFTTTNHQWILFFTNMGRVYRTKVWQLPEAGR
DAKGGHVAGLLSFLPDEKIAQVMTLRSYDGAEYLLLATRKGMVKKTALKAYDSSRQAGVI
AVNFRTEDDELIGAEQCSAADDVLLISRKGQAIRFSAGDDQLRPMGRATSGVTGMKFRGD
DELLSMSIIHSDMPEDDRFVFTATGGGYAKRTAVSEYRQQGRGGVGIKAMALSEERGSLV
GGLVVSEADEIIAIKTSGQITRSAVSEVPAKGRSTMGVKFVSVRGGDAVSIIAVNPEHTV
EEEVADESVETVEGDATQAQSGGVVRRSDTVDDDRAVDTAGNDMKPEDNGE
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgacgagaagcccgacgagcagaaccaggccgaccgtcaaggattggtgacc
ggccgtcacgtcggaatccagccggtcgagattcgtgacgagatccagaacgcgtacctc
gactacgcgatgagcgtcatcgtcgggcgtgccctgcccgatgtgcgcgacggcctcaaa
ccggtacaccgtcgggtcatctacgcgatgtacgacggcggttaccgccccgaccgcggc
tggaacaagtgctcccgcgtcgtcggtgacgtcatgggtaagtaccaccctcacggcgac
tcggccatttacgacaccttggtgcgtctggctcagccatgggccatgcgatacaagctt
gtccagggtcagggtaacttcgggtcccagggcaacgacggtgcggctgccatgcgatac
accgagtgcaagatggcgccgctggccatggagatggtgcgcgacatcgaccaggacact
gtcgatttccagcccaactatgacaacaaggagaccgaaccggtcgtcttgccgtcgagg
ttccccaacctgcttgtcaatggttcttcaggtatcgcggtgggcatggccaccaacatc
ccgacccataatctgcgcgaggtcaacgaggccgtgcagtggtctttggctcaccccaat
gcttcccacgaggaactgctcgaggcgtgcatggagcgcattaagggtccggatttcccc
ggcggcgccctcattgtgggtcggcagggcatcgaggacgcctaccgcaccggccgcggt
tcggtgacgatgcgtgccgtcatcgacatggaagaggacaagaagggacgccagtgcctg
gtcgtcaccgagttgccttatatgtgcaacccggacaacctcgccaccaagatcgccgac
ctggtgaactccggtcgcatcaacggtatcgccgacatccgtgacgactcctcagcccgt
actggtcagcgtttagtcatcgtcctcaagcgtgacgctcagccgcgtgtcgtcatgaac
aacctgtacaagcacacggctttgcaggacaccttcggctgcaacatgctggctctggtg
gacaacgtgccgcgcaccttgcgtctggaccaattcatcagctactggattgaccaccag
atggaggtcatccgcaggcgtaccgagtaccgcctggctcaggccgaaaaagacgcccac
atccagcgggctctcgtcaaggccctcgatatgctcgacgaggtcatcgcgctcatccgt
cgctccccgaacactgaggccgccagcaccggcctacaggaactgcttgatatcgacgag
attcaggctcgcgccatcctcgatatgcagttgcgtcgtctggctgccctggagcgtcaa
aagatcatcgaccgacttgaagaactcgagcgcctcatcgctgattacaaagcaattctg
gctagcgaggaccgccagcgcgagatcatctctaccgagcttgccgagatcgtcgataag
tatggtgacgagcgtcgcacccgcattatcgccgccgatggggacttttccgaggaagac
ttcatccccgacgatgacgtcgtcgtcaccattacccggggcggctacgccaagcgcacc
cgcactgacctgtaccgggtccagaaacgcggtggcaagggtgttcgcggcgccagcctg
cgcgctgacgacgaggtggcacagctattcactaccacgaaccaccagtggatcctcttc
ttcacaaatatgggtcgggtgtatcgcaccaaggtatggcagctgccggaggctggtcgt
gacgccaaggggggtcacgtcgctgggttgctgagcttcctgcccgacgagaagatcgcc
caagtcatgaccctacggtcctacgacggcgccgagtacctcctcctggccactcgtaag
ggtatggtcaagaagacggcgctcaaggcttatgactcgtctcgtcaggccggcgttatc
gccgttaatttccgtaccgaggacgatgagctcatcggcgccgagcagtgctccgccgct
gacgacgtgctgcttatcagccgtaaggggcaagcgatccggttctctgccggcgacgac
cagctgcgcccgatggggcgtgcgacttcgggcgttaccggcatgaagttccgtggtgat
gacgagttgctgtcaatgtcgatcatccactccgacatgcctgaggatgatcggttcgtt
ttcacagcaaccggtggcggctacgccaagcgcactgctgtgtcggaataccgtcagcag
gggcgtgggggagtcggcatcaaagcgatggccctcagtgaggagcgcggctccctggtt
ggtggcctggtggtcagcgaggctgacgaaatcatcgcgattaagacgtcaggtcagatc
acccgatcggccgtgtctgaggtgcccgccaagggacgctccacgatgggggtcaagttc
gtctccgtacgaggtggcgacgctgtctcaatcatcgctgtcaaccccgaacataccgtc
gaggaggaagtcgctgacgaatcagtggaaactgttgaaggcgatgccacgcaggcccaa
tcgggaggtgtggttcggcgaagcgatactgtggacgacgaccgtgccgtcgatacggcg
ggaaacgacatgaagccggaggacaacggtgagtga
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