Candidatus Pseudomonas adelgestsugas: C3B55_00578
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Entry
C3B55_00578 CDS
T05857
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pade
Candidatus Pseudomonas adelgestsugas
Pathway
pade00470
D-Amino acid metabolism
pade00550
Peptidoglycan biosynthesis
pade01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pade00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C3B55_00578 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C3B55_00578 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pade01011
]
C3B55_00578 (murD)
Enzymes [BR:
pade01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
C3B55_00578 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pade01011
]
Precursor biosynthesis
Amino acid ligase
C3B55_00578 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
QAX81911
LinkDB
All DBs
Position
complement(971877..973217)
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AA seq
446 aa
AA seq
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MITADHFYIVVGLGNSGMSIVRFLVNRGMLFAVADTRNNPPGLAALRRTHPHLEVCCGEL
DVEFLCRADELYVSPGVDLATYALQAAAARGVKLSGDIDLFARYAKAPIVAISGSNAKST
VTTLVGEMAAMAGKRVAVGGNIGMLALDLLSDDIELYVIELSSFQLDTTHNLSAEVATVL
NISEDHMNRYSSFTAYCLAKHRIFQSVKQLVVNRHDALSCPLIGENQTCWTFGLSKPDFK
SFGIREKNGEQYLAFEFQNLMLVRDLKIRGAHNQSNALAALALGHAVGLPFDAMLASLRM
FTGLEHRCQWVRNLNGVSYYNDSKATNVGATLAAIEGLSSDIDGKIVLIAGGDSKGANLK
DLIKPVATHCRAVVLIGSDSNLIYATLGNAALQVRVMSLNDAIIHSRALAEPGDVVLLSP
ACASFDMFKNYEERGQLFTRAVEALV
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgatcactgcagatcacttctacattgttgttggccttggcaatagtggtatgtctata
gttcgtttcctagttaatcgtggcatgttatttgctgttgcagatacgcgaaacaatcca
cctggactagctgcgctacgccgtactcacccgcatttagaagtgtgttgcggtgagcta
gatgtcgagtttctatgtcgtgctgacgagctttacgtaagccccggtgtagacttagca
acatacgctctgcaagctgctgcagcacgtggcgtgaagctgtccggtgatattgactta
tttgcgcgttatgcgaaggcaccgatcgtagctattagtggttctaacgcaaagagcaca
gtgaccactttagttggtgagatggcagccatggccggtaagcgcgtggctgttggcggt
aatatcggcatgttggcgctggatttactcagtgatgacatcgagttgtacgtgatagag
ctgtcaagcttccagcttgacaccactcataatctgagcgcagaagtagcgaccgtgcta
aacataagcgaagaccatatgaaccgttacagtagctttacggcgtattgcttagctaag
cacaggatttttcaaagtgtcaaacaattggtggtcaaccgtcatgatgccctcagttgt
ccgctgataggcgagaatcagacgtgttggacgtttggtctcagcaaaccagatttcaaa
tcttttggtattcgcgaaaagaatggtgaacaatatttagccttcgaatttcagaattta
atgctagtgcgagaccttaaaatccgtggtgcgcataaccaatccaatgccctagcagcg
ttggcgctagggcatgcagttggtctgccgtttgatgcaatgctcgctagcttgcgtatg
tttaccggccttgaacatcgttgtcaatgggtacgcaaccttaatggtgttagctattac
aatgattctaaggctaccaatgtcggtgcaacattagccgcaatcgaaggcctgagctct
gatattgatggtaagatcgtattgattgctggtggtgatagcaagggtgctaacctcaag
gatctgataaaaccggtagctacccattgtcgcgctgtagtgctaattggtagtgactca
aatttgatttacgccactttaggcaacgctgcgctacaagtacgcgttatgtccttaaat
gatgccatcatccatagcagggctctagcagaacctggtgatgtagtgctgctatcgccg
gcgtgcgctagttttgacatgtttaaaaattacgaagagcgcggtcagctttttactcgc
gctgtagaggctttggtatga
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