Pygoscelis adeliae (Adelie penguin): 103914220
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Entry
103914220 CDS
T06012
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
padl04147
]
103914220 (COL18A1)
00535 Proteoglycans [BR:
padl00535
]
103914220 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
padl00536
]
103914220 (COL18A1)
Exosome [BR:
padl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103914220 (COL18A1)
Proteoglycans [BR:
padl00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
103914220 (COL18A1)
Glycosaminoglycan binding proteins [BR:
padl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103914220 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Maestro_HEAT
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
103914220
NCBI-ProteinID:
XP_009319111
LinkDB
All DBs
Position
Unknown
AA seq
1938 aa
AA seq
DB search
MAERAPSVPRLAWLGGEEEKGAGAAPAWQPDEVEEVQPLQADPDWDRPEEEQEQEHTRAL
FHSRAQIFWESLKPTEREETTITAIEGMADSDSYNAEACAAMLDVLVESDVSDLEHVPSI
VRCIYRWLTSNTDVSAERRLDNTLLELTHVHAHDVVIFWESLKPTEREETTITAIEGMAD
SDSYNAEACAAMLDVLVESDVSDLEHVPSIVRCIYRWLTSNTDVSAERRLDNTLLELTHV
HAHDVVVTLLRCAPWCDSNAVTMWRTMVSTSGTAEKVLLELLCVLEDWPLHSTSTSDGDK
KDVFALALLDCPNIVGRGYRILKLLSRYLRSECRVMHRLVLRGLILFCKRPLMLLDCPNI
VGRGYRILKLLSRYLRSECRVMHRLVLRGLILFCKRPLMAERMQFLLPRLIELLQDADGE
VAGMTLSVLRKVLLAKDVPLTSRIALQLAERLRPLFDNDANYVQLLSIHLFRHVMEFVEE
VGKKPLKTHVHQSLLPLLCHLHDENRRVAEASRETLLQATEFLKKRKLRQLLEREQPWAV
SERLLLDWIWDSVKTVGSPVAPGEGTAAPEPLASPAAPTPSVSPGTWGGQVVGDITTPQC
QEPDPSTAAPMIKGTAAENTKQWDGNATGLVESTAWPSIAPPHSTSPAPGQDAASSSTED
AQLLGKGTTEEPQLLGTGITEDPQLLGMGNTEDPQLLGTGTPAATGTQVSLQRPAGPRPE
NLSAEVSLLELIGDPPPEEILKIYGPDNNPGYVFGPNANTGQVARYHLPSPFYRDFSLLF
HIQPTTPRAGVLFAVTDSSQSIIYVGVKLSELRVGKQQIIFYYTEPGSTSSYAAATFTVP
TLLNQWTRFAISVEEDEVVLYLDCEEHERVRFERSPDEMELEDGSGLFVAQAGGADPDKY
QGVIADLKLQGDPRAAERQCEEEEDDTEVSGDFGSGAEGGRQASGKDRGVPGLVDAVPVT
SPPVAAGSGPRSGGGSPQQAERTRAEGTLRVSAGGTGPKGEKGEKGERGLKGDSGTGSIM
GTGSVKGEKGEKGELGVKGSAGFGYPGSKGQKGEPGDPGTPGTLSRHTNGLMVEQVTGPP
GPPGCLLACLPGDPGEDGKPGDMGPQGFPGMPGEPGLKGEKGDPGMGPRGPPGPPGPPGL
PGPSSKHDKLTFIDMEGSGFGGDLESLRGPRGPPGPPGPPGVPGLPGEPGRFGMNLTDLL
GPPGLPGRDGTPGPPGPAGPQGPPGRDGAAGQMGPKGEQGDVGDLGLPGAPGPKGSKGET
GPAGAPGEMGLAGLPGPIGPRGQPGPPGPPGPPGPVYEAGFGDMEGSGLPFAASSPGPPG
PEGPQGVPGLPGVKGEVGSPGQPGLPGPKGDAGVPGVDGRPGLEGFPGPQGPKGDRGSPG
EKGERGQDGVGLPGPPGPPGPPGQVIAVSSEDKSLAALPGPEGRPGHAGFPGPVGPKGDR
GLSGPQGSPGLKGEKGEPGVIISPDGTVVTAKVKGEKGDPGVRGPMGPLGPQGRAGMKGE
IGFPGRPGRPGMNGLKGEKGDPADVSSVLGLRGPPGPPGPPGPPGLPGSIVYDSSNAFSD
TSHPALPAFPGFHQFPGQKGEKGDAGAPGPPGHFPYDLSHFGANLRGDKGEAGPKGEKGE
PGSTPLYGPSVSGLPGPPGPQGYPGLPGPKGDSIVGPPGPPGPQGPPGIGYEGQQGPPGP
PGPPGPPSFPGPHRQAISIPGPPGPPGPPGPPGTSTTSLGPPALPTYQAMLSSMHELPEG
GLVFLTDRQELYVRLRGGFRRVLLHLVALNAPLSGGMRGIRGADFHCFQQARQVGLAGTF
RAFLSSRLQDLYSIVRRADRAAVPIVNLRDEVLFSNWEALFTGSGAPLRAGARILSFDGR
DVLRDAGWPQKSIWHGSDAKGRRLPESYCETWRTEERAATGQASSLGSGKLLEQAASSCQ
HAFVVLCIENSFMTAAKK
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagagcccccagcgtgcccaggctggcctggctcgggggggaggaggagaaa
ggcgctggggctgccccagcatggcagcctgatgaggtggaggaggtccagccgctgcag
gcggatccagactgggaccggccagaagaggagcaggagcaggaacacacccgtgccctc
ttccacagcagagcacagatattttgggaatccctcaagcccactgagcgtgaagaaacc
accatcacggccatcgagggcatggcagactctgactcctataatgcggaggcttgtgct
gccatgctggatgtgcttgtggaaagcgacgtctccgatttggagcatgtgccgagcatc
gtgaggtgcatctaccggtggctcacgtccaacacagatgtgtctgccgagcgcaggctg
gacaacacccttctggagctgacccacgtgcacgcccatgatgtggtgatattttgggaa
tccctcaagcccactgagcgtgaagaaaccaccatcacggccatcgagggcatggcagac
tctgactcctataatgcggaggcttgtgctgccatgctggatgtgcttgtggaaagcgac
gtctccgatttggagcatgtgccgagcatcgtgaggtgcatctaccggtggctcacgtcc
aacacagatgtgtctgccgagcgcaggctggacaacacccttctggagctgacccacgtg
cacgcccatgatgtggtggtgaccctcctgcgctgtgccccatggtgcgacagcaatgcc
gtgacgatgtggaggacgatggtctccacgagtgggactgcagagaaggtgctgctggag
ctgctctgcgtgctggaggactggccgctgcacagcacgtccacctccgacggggacaaa
aaggacgtctttgccctggctctcctggactgccctaacatagtgggacggggttaccgc
atcctgaagctcttgtcaaggtacctgcggagtgagtgcagagtgatgcatcgcctggtg
ctcagaggcctcatcctgttctgcaagagacccttgatgctcctggactgccctaacata
gtgggacggggttaccgcatcctgaagctcttgtcaaggtacctgcggagtgagtgcaga
gtgatgcatcgcctggtgctcagaggcctcatcctgttctgcaagagacccttgatggcc
gaaagaatgcagttcctgctgccaaggctcatagagctactgcaggatgcagacggggag
gtggccgggatgaccctctctgtgctcaggaaggtgctcctggccaaagacgtcccactt
accagccgcatcgctctgcagctggctgagaggctccggccactctttgacaacgacgcc
aactatgtgcagctgctctccattcacctcttccgacatgtgatggagtttgtagaggaa
gtgggaaaaaagccactgaagacgcatgtgcaccagagcctgctcccgctgctctgccac
ttgcatgatgagaaccggcgcgtggcggaggcctctcgggaaaccctgcttcaggctacc
gagttcctgaagaagaggaagctcaggcagctgctggagagggagcagccatgggcggtc
agtgagcgcctgctcctggactggatttgggacagcgtgaagaccgtgggaagcccagtg
gcacccggcgagggaaccgcggcaccggagccgctcgcctctccggcagctcccaccccc
agcgtgtccccggggacgtggggtggccaggtggtgggggacatcaccaccccacagtgc
caggagccggatcccagcacagcagcacctatgatcaaggggaccgcagctgaaaacacc
aagcagtgggacgggaatgccacggggctggtggagagcacagcgtggccaagcatcgct
cctccccacagcacgtcacctgcccctggccaggatgcggccagcagctccaccgaggac
gcgcagctcctggggaaagggaccaccgaggagccacagctcctggggacagggatcacc
gaggacccgcagctcctggggatggggaacactgaggacccgcagctcctggggacgggg
acccccgcagcgacggggacacaggtgtccttgcagagaccggcgggtccccggccagag
aacctgagcgctgaggtcagcctcctggagcttattggagaccccccgccggaggagatc
ctcaaaatttatggccccgacaacaaccccggctatgtcttcggccccaatgccaacacg
ggccaggtggcccggtaccacctgccgagccctttctaccgggacttttcccttctgttc
cacatccagcccaccaccccccgggccggtgtgctctttgccgtcacagactcctcacag
agtatcatctatgtgggcgtcaagctctcagagctgcgggtgggcaagcagcagatcatc
ttctactacacagagccaggctcaacaagctcatatgcagcagccaccttcactgtgccc
accttgctcaaccagtggacgcgcttcgccatcagcgtggaggaggatgaagtcgttctc
tacctggactgtgaggagcatgagcgggtccgctttgagcgctccccggatgagatggaa
ctggaagatggctctgggctctttgttgctcaggctggaggagctgacccagataaatac
cagggggtgattgccgacttgaagctgcaaggggacccgcgggcggctgagcgccagtgt
gaggaagaagaggacgacactgaggtctctggtgattttggcagcggggcagaaggtgga
cgccaagcctcggggaaagacagaggtgtcccagggctggtggatgccgtccctgtcacc
tctccccctgtggcagcgggcagtgggccaaggagcggtggaggctccccacagcaagct
gagaggaccagagcagaggggacactgcgggtctctgcgggaggcactggccccaaaggt
gaaaagggggagaagggcgagcgtggcctgaagggggactctgggaccggcagcatcatg
gggacgggcagtgtcaagggtgaaaagggggagaaaggagaactgggtgttaagggcagc
gctggatttggctaccctggctccaagggccagaaaggggagccgggtgaccccggcacc
cccgggaccctctcgcggcacactaacggcttgatggtggagcaggtcaccggtcctcca
gggccgccggggtgcctgcttgcctgcctgcctggcgatcccggcgaggatggcaaaccc
ggcgatatgggaccgcaggggttccctgggatgccaggggagcctggtctgaagggggag
aagggtgacccaggcatggggccaaggggaccgcctggaccacccggtcccccaggactg
ccaggaccctcctccaagcacgacaagctgaccttcatcgacatggagggctctggcttt
ggcggcgacctggagagcctgcggggtccacgagggccacctggtcccccagggccaccc
ggcgtgcctggtttgccaggggagccaggacggtttgggatgaacctcacggacctgctg
ggaccaccagggctgccaggcagggatgggacccccgggcccccggggccagcgggtcct
cagggtcctcctggaagagacggggcggctgggcagatgggacccaaaggagagcagggc
gatgtgggtgacctcggcctccctggtgcaccgggacccaagggcagcaagggagaaacg
ggaccagcaggagccccgggagaaatggggttagctggccttcccgggcccattggaccc
cgaggacagccggggccccccggtcccccgggaccaccagggccagtctatgaggctgga
tttggcgacatggagggctcggggctgccgttcgctgccagctcccccggaccacccgga
cctgaaggaccacagggggtgccgggactgccaggggtgaagggggaggtcggcagccct
gggcagcccggcttgccaggaccgaagggagatgctggcgtgcccggcgtggatggccgc
cctggactggagggcttccctggaccgcagggacccaaaggtgacagaggcagccccggt
gagaagggtgagcgaggccaagatggtgtggggctgcccggccctcccggtccacctggt
ccccctggacaggtcatcgctgtctcaagtgaagataagtctttggcagctttgcccggt
ccagagggcagaccgggtcacgccggcttcccgggcccagtgggaccgaaaggagaccgg
gggttgtctggtccccagggctccccagggttgaagggggagaagggggagcctggcgtc
atcatcagccccgatgggactgtggtcactgcaaaggtgaaaggagaaaagggggatcca
ggggttcggggaccgatgggacctttgggtccccagggacgagcagggatgaagggagag
atcggctttccaggcagacccggacgtcccggcatgaatgggctgaagggcgagaagggt
gaccccgcggatgtcagtagtgtgctgggcttgcggggtcccccaggacccccgggtccc
ccaggcccccctgggctgcctggcagcatagtatatgacagcagcaatgccttcagcgac
accagccatcccgcgctgccagccttccctggtttccaccagtttccaggacaaaaggga
gagaaaggcgatgccggagccccgggacccccaggccacttcccctacgacctgagtcac
tttggtgccaacctgcggggtgacaagggggaggcaggtcccaagggcgagaagggcgag
ccgggcagcaccccgctctacggtcccagcgtctccgggctgccagggcctccggggcct
cagggctaccccgggctgccaggtcccaagggggacagtattgtcgggccaccagggcct
cccggacctcagggcccccccggtattggatacgaggggcagcagggtccccctggccct
cctggcccccctggtccaccctccttcccagggccccacagacaagctatcagcatccct
ggccctcccggaccaccaggaccccccgggccaccaggcaccagcacaacgtccttgggg
ccgcccgccctcccgacctaccaggcgatgctgagctccatgcacgagctgcccgagggt
ggcctcgtcttcctgaccgaccggcaagaactctatgtccgcctgcgtgggggcttccgc
cgggtgctgcttcacctggtggccctgaacgccccactgagcggtggcatgcgcggcatc
cgaggcgctgacttccattgcttccagcaagcccggcaggtcgggctggccggcaccttc
cgtgccttcctctcctcccgcctgcaggacctctacagcatcgtgcgcagggccgaccgc
gccgctgtgcccattgtcaacctccgggacgaagtgctcttcagtaactgggaagccctt
tttacgggcagcggggccccactgcgagccggcgcccgcatcctctccttcgatggccgg
gatgtcctgcgggatgcgggatggccgcagaagagcatctggcacggctcagatgccaag
ggccggcgcttgcccgagagctactgtgagacatggcggacagaggagcgggccgccacc
ggccaggcttcctcgctgggctctggcaagctgctggagcaagcagccagcagctgccag
catgccttcgtcgtcctctgcatcgagaacagcttcatgactgctgccaaaaagtga
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