Pygoscelis adeliae (Adelie penguin): 103914318
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Entry
103914318 CDS
T06012
Symbol
COL22A1
Name
(RefSeq) collagen alpha-1(XXII) chain
KO
K16630
collagen type XXII alpha
Organism
padl
Pygoscelis adeliae (Adelie penguin)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Motif
Other DBs
NCBI-GeneID:
103914318
NCBI-ProteinID:
XP_009319209
LinkDB
All DBs
Position
Unknown
AA seq
1584 aa
AA seq
DB search
MSIMGRCRVPHLLVLLTFVLTGERIEAQRAGCKNVHYDLVFILDASSSVGKEDFEKVRQW
VSNLVETFEIGPDKTRVGVVRYSDRPTTEFDLGKYKTREEIKEAARNIKYYGGNTNTGDA
LRYINTYSFSKEAGGRLSDRTVKKVAILLTDGRSQDYVLDPATATHQAGIRVFAVGVGEA
LKEELDEIASEPKSAHVFHVSDYNAIDKIRGKLRRRLCENVLCPNVHVEGDRFKHTSGGT
DEIPGFDLMDSFSVKQIFGMKENGIQSAYVRLGSFPVVQKTEDVFPQGLPDEYAFVTTFK
FRKASRKEDWYIWQIIDKYGIPQVSIRLDGENKAVEYNAIGLTKDAVRVVFRNARVSDLF
DRSWHKIALSIQSKAVSLYIDCGLVQVLPIEDRENIDIQGKTVIGKRLYDSVPIDFDLQR
MVIYCDSRHADLETCCDIPSGPCQVTVLTEAPPLEVRPTVGNEQVGHLKTVNCSCPAGQK
GERGPIGPEGPKGQKGESGSQGLPGLRGEKGESGRAYGRGEKGEKGSLGSPGPPGKDGAK
GEAGEPGQPGAFGLPGPAGPKGSEGKQGPPGIKGYVGAPGEQGLDGFPGKPGVEGKQGPA
GSPGPPGASGTKGEKHSTGEPGLPGLPGSSVRTEGLKGEQGEPGLQGPQGQPGLPGPPGE
AGLEGKPGVPGLPGQRGKKGEPGFPGINGLIGPQGPPGPPGIAGPPGPPGAPGLPGEIGV
SGKTGPLGPAGLPGKDGLNGLPGLPGQKGEQGEKGEEGFPGKAGPKGEPGSHGQPGEEGE
AGLPGPQGLPGLRGEKGDQGEKGKGGLPGLKGERGEKGDTGSPGPPGLPGTTAFFTPHPR
IPGEPGPKGEKGDPGTSGEPGLPGVPGEQGVPGPAGGQGTKGQKGARGEAGAPGETGVTG
PAGPPGPRGLPGNVGVPGGPGLPGKEGTKGEKGDPGKEGKVGLPGPAGEPGPAGEPGLPG
KGKDGEQGQRGPPGLPGPFGHKGERGAPGLPGQPGDRGVPGIGLAGPPGPLGPPGDKGSL
GPRGVPGIPGPQGPPGQDGLPGNPGERGPPGKPGSSPLLSPEDINLLVKDVCSECPPGPP
GLPGIPGFKGDKGLRGPPGRDGQDGKMGNAGPRGPAGPPGLDGPKGAKGDRGMTGDAGEK
GEQGHPGIPGFSGAPGNPGPPGPDGAPGPIGPAGNPGDIGKDGPPGPQGPPGLPGLPGIA
GNDGKDGKPGSLGEPGKPGEPGLPGQEGARGLPGFKGQRGDTGPPGPRGEPGATGPAGRE
GPPGKDGDTGPIGPQGPRGLRGQPGKNGSPGSAGEPGPAGNPGPKGNKGENGSPGLPGFV
GPRGPPGEPGEKGPPGKEGAPGKPGDIGSKGERGEPGIKGEKGPQGEKGPPGDPGIPGHK
GHPGLMGPHGPPGDTGQVGPPGPPGQPGFPGPRGESPSLETLRRLIQEELAKQLDAKLAY
LLAQIQPAHVKASHGRPGPPGPPGKEGLPGRTGPPGEPGQPGLTGSEGPPGPIGPKGERG
AKGERGDTGIGQRGEIGPPGIPGLPGEPGYAKDGMPGPPGPQGEAGVPGLTGPQGPPGAN
GQCDPTQCAYYASLAARPVNVKGP
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgtccattatgggaagatgccgcgtgccccatctcctagttcttctcacattcgtgctc
accggggagcgaattgaggcacaaagagcaggttgcaagaatgttcactatgaccttgtc
ttcatcttggatgcctcctccagcgtcggaaaagaagattttgagaaagttcggcagtgg
gtgtctaatttggtggaaacttttgagattggcccagacaaaacccgtgtaggtgtggtg
cgatacagtgatcgtccaaccacagagtttgacctgggaaagtacaaaacccgtgaggaa
atcaaagaggctgcacgaaacattaagtattatgggggtaatacgaacactggagatgct
ctcaggtacatcaacacctacagtttttccaaagaagctggtgggagacttagtgatcga
actgttaaaaaagtggctatccttctgactgatggaaggagccaggattatgtcttggat
ccagccactgcaactcatcaggctgggattagggtctttgctgtgggtgttggcgaagcc
ttaaaagaggaactcgatgagattgcttcagaacccaagtctgctcacgtgtttcatgtc
tccgattacaacgccatcgataaaattcggggaaagctgagaagacgtctgtgtgaaaat
gttctgtgtccaaatgtccacgtggaaggagatcgattcaaacacaccagtggagggact
gatgagattccaggatttgacctgatggattcattcagtgtgaaacagatttttggaatg
aaagaaaatggaattcagagcgcttatgtacgacttggaagctttcctgttgttcagaaa
actgaggatgtatttcctcaaggtctgcctgatgaatatgcctttgtaactaccttcaaa
ttccggaaggcttccaggaaagaagactggtatatttggcagattattgacaagtatggc
ataccacaggtctcgatccgactggacggagagaacaaagctgtggagtacaatgccatt
gggctcaccaaggacgccgtgagagtggtcttccgaaatgcacgagtcagtgatcttttt
gaccgcagctggcacaaaattgccctcagcattcagtcaaaggctgtctcactttacata
gactgcggactggtgcaggtgctgcctattgaagacagggaaaatattgacattcaagga
aagactgtgattggcaaacgcttgtatgatagcgtccccattgattttgatcttcagcgg
atggttatttactgtgattctcggcatgctgacttggagacctgctgtgacattccctct
ggaccatgccaggtcacggtcctgacggaagcacctcccctggaagtgaggcccactgtt
ggcaacgagcaagtgggccacctcaagactgtcaactgctcctgtcctgctggacaaaag
ggggagagaggtccaattggtcctgaaggtcctaaaggtcaaaagggagaaagtggcagc
caagggcttcctgggctcagaggagaaaaaggagagtcaggcagagcctacggcagagga
gaaaaaggagaaaaggggtccctgggctcacctggcccccctgggaaggatggagcaaaa
ggcgaagccggtgaaccaggacagccaggagcatttgggctgcctgggccagcaggtcca
aagggatctgagggaaaacagggtcctccaggaattaaaggctacgtaggagcaccggga
gaacaaggcctagatgggttccctggcaagccaggtgtggaggggaaacagggccctgct
ggcagcccgggccctccaggtgccagtgggaccaaaggagaaaagcacagcactggtgaa
ccaggacttccaggattgcctggctcgtcagtgcgtactgaaggcctaaaaggagagcaa
ggagagcctgggctacaaggaccacaaggccaacctggacttcctggacctccgggagag
gctggtctggaaggcaagcctggagtccctggtttaccaggtcaaaggggtaaaaaggga
gagcctggattcccaggaatcaatggtctgatcggccctcagggacctccagggccccca
ggcattgctggaccccctggaccacctggagcaccaggactgccaggagagattggagtt
tctggtaaaaccggaccactggggccagctgggttgcctggcaaagatggattaaatggg
cttcctgggcttccaggacaaaagggagaacaaggggaaaagggtgaggaaggctttcct
ggaaaagctggccctaagggtgaaccagggagccatggccaacctggtgaggagggtgaa
gcaggtcttcctggtcctcagggtttacctggactgagaggagaaaaaggagaccaggga
gaaaaaggaaaaggtggtctcccagggttgaaaggtgaaagaggagaaaagggtgacacg
ggttcccctggaccaccaggtttacctggaacaacagccttcttcaccccacaccctagg
attcctggtgaacctggaccaaagggggagaaaggagatccaggaacgagcggagaacct
ggattacctggggtcccaggtgaacaaggtgtcccaggacctgcaggaggacagggcaca
aaggggcagaaaggagcccgaggtgaagccggagcccctggagagactggtgtgactgga
ccagcagggcccccaggtccaagaggcttgccaggaaatgtgggtgtgcctggaggccct
ggactaccaggaaaggagggaacaaagggggaaaagggtgatcctggaaaagaaggaaaa
gtgggtttacctgggccagctggtgagccagggcctgctggagagccaggtttgcctggt
aagggtaaagatggagaacaggggcaaagaggcccaccaggcttgccaggaccctttgga
cataagggtgagaggggagctcctggcctccctggacagccaggagacagaggtgtgcca
ggaatcggtctggctggaccccctggccctctgggacccccaggagacaaagggtcattg
ggtccccgcggtgtacctggtatccctggaccacaggggcctcctggccaggatggtcta
cctggaaatccaggggaaagaggacctcctggaaaaccaggttcctcacccctgctctct
ccagaggacataaatctattagtaaaggatgtgtgcagtgaatgccctcctggcccacca
ggactgccaggcatcccgggtttcaaaggtgataaaggtctccgaggaccaccaggtaga
gatggccaggatgggaaaatggggaatgctggtcccagaggtcctgcaggcccacctggg
ctggatggcccaaagggtgctaaaggagaccgtggtatgactggggatgcaggagaaaaa
ggtgaacagggccaccctggaatacctggcttctcaggggctcctggaaaccctggtcca
cctggaccagatggggcaccaggaccaataggaccagcaggaaacccaggagacataggt
aaagatggccctccaggtccacagggcccaccagggctgcctggactgccaggcattgct
gggaatgacggcaaagatggcaagccaggatctcttggggaaccgggaaagcctggagaa
ccagggctcccaggccaggagggtgccagaggtttaccgggtttcaaaggacagagagga
gatacaggtcccccaggtccccggggggagccaggtgcgacaggtcctgctgggcgtgag
gggccaccagggaaggatggtgataccggtcccataggaccacagggccctcgaggactc
agagggcaaccgggcaagaatggatcgcctggatccgcaggagaacctggcccagcaggt
aacccaggtcctaaaggaaataaaggagaaaacggcagcccaggactccctggctttgta
ggaccccgaggaccacctggagaaccaggagagaagggtcctcctggaaaagagggtgca
ccagggaaaccaggtgacattggctccaaaggagagaggggagagcctggcatcaaaggt
gaaaaaggccctcaaggagaaaagggccctccaggtgatcctgggatacctggtcataaa
ggccatccaggactgatgggtcctcatggacccccaggagacactgggcaagttggacct
cccggtcctccaggacagccaggatttccaggaccaaggggggaatccccatctctagag
actttgagaaggctcatccaagaggagttagccaagcagctagatgcaaagttagcctat
ctcctggctcagatacagcctgcacatgtaaaagcgtcccatggcagaccaggacctcct
ggtccccccgggaaggaaggactcccaggaagaactggccctccaggagagcctggacaa
cctggactgactgggtctgaagggccacctggaccaattggacctaaaggagaaagagga
gcaaagggtgagaggggagacactggcattggccaacgaggagaaataggtcctccagga
attccaggcctcccaggggagcctggctatgccaaagatgggatgccagggccacctggc
cctcaaggcgaagctggtgtgcctggtctcacgggtccacagggacctccgggagccaac
ggacagtgtgaccccactcagtgcgcttactatgcaagcctggctgccagacccgttaat
gtcaaagggccctag
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