Pygoscelis adeliae (Adelie penguin): 103915342 Help Entry 103915342         CDS       T06012                                  Symbol COL5A1 Name (RefSeq) collagen alpha-1(V) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism padl  Pygoscelis adeliae (Adelie penguin) Pathway padl04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:padl00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     103915342 (COL5A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:padl00536]     103915342 (COL5A1) Glycosaminoglycan binding proteins [BR:padl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    103915342 (COL5A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_1 Motif Other DBs NCBI-GeneID:  103915342 NCBI-ProteinID:  XP_009320426 LinkDB All DBs Position Unknown AA seq 1810 aa AA seqDB search MAYVQCSEPADLLKVLDFHNLPDGITKTTGFCTSRRSSKEADVAYRVTKDAQLSAPTKQL YPASPFPEDFSILTTVKAKKGGQSFLISIYNEQGIQQIGVEMGRSPVFLYEDHTGKPGPE DYPLFRGINLADGKWHRVAISVQKKNVTLILDCKKKITKFLDRSDHPIIDVNGIIVFGTR ILDEEVFEGDIQQLLLLADPRAAHDYCEHYSPDCDTAIPDSPQSQDPNQDEYYTDGEGEG DTYYYEYPYYEDVDEAVKPEAPTSKPGTPEVAAGERPETKQDYPAPTPSPDGGDPGKRTK GDAVVDDPLVDEYNYETINEEYFTPLPYEDVNYNEEVDPQGGLTENTVEAELPTSTVITY NETDAAQGGDDLDKDFTEETIKEYDGNYYDNYYDRTASPDIGPGMPANQDTIYEGIGGPR GEKGQKGEPAIIEPGMLVEGPPGPEGPAGLPGPPGPTGPVGLMGDPGERGPPGRPGLPGA DGLPGPPGTMLMLPFRFSGGGDAGSKGPLVSAQEAQAQAILQQARLALRGPAGPMGLTGR PGPMGPPGSGGLKGEAGDMGPQGPRGIQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGD RGFDGLAGLPGEKGNRGEPGPHGPPGAPGEDGERGDDGEVGPRGLPGEPGPRGLLGPKGP PGPPGPPGVAGMDGQTGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGK PGLPGMPGADGPPGHPGKEGPPGEKGSQGPPGPQGPIGYPGPRGVKGADGVRGLKGTKGE KGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRSGPNGDPGPLGPAGEKGKLGV PGLPGYPGRQGPKGSIGFPGFPGANGEKGTRGTPGKPGPRGQRGPTGPRGERGPRGSTGK PGPKGNSGGDGPPGPPGERGPPGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGK TGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLTGKEGTKGDPGPAGLPGK DGPPGLRGFPGERGLPGPIGAPGLKGNEGPPGPPGPAGSPGERGPAGSAGPIGLPGRPGP QGPPGPSGEKGAPGEKGPQGPAGRDGIQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGS KGDKGEQGPPGPTGPQGPIGQPGPAGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGL QGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGPPGADGPQGPPGGIGNPGAVGEKGEPGE SGEPGLPGEVGLPGPKGERGEKGEAGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGP PGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGA KGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGL PGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSAGPKGEQGITGPSGPIGP PGPPGLPGPPGPKGAKGSSGPTGPKGESGLPGPPGPPGPPGEVIQPLPIQSSKRTRRNID ASQLVDDGNADNYMDYADGMEEIFGSLNSLKLEIEQMKHPLGTQHNPARTCKDLQLCHPD FPDGEYWVDPNQGCSRDSFKVYCNFTAGGETCIFPDKKSEGARITSWPKENPGSWFSEFK RGKLLSYVDSDGNPIGVVQMTFLRLLSASAHQNITYNCYQSVAWHEATTNSYDKAIRFLG SNDEEMSYDNNPYIRAALDGCAAKKGYQKTILEINTPKVEQVPIVDIMFNDFGEASQKFG FEVGPACFMG NT seq 5433 nt NT seq  +upstreamnt  +downstreamnt atggcttatgtgcagtgctctgaacctgcagatctcttgaaggtattagattttcataat ttacctgatggtataacaaaaacaacagggttttgcacaagcagaagatcttcgaaagaa gcagatgttgcttatagagtaacaaaagatgctcagcttagtgcaccgacaaagcagctg tatcctgcttccccattcccagaggacttctccattctaaccactgtaaaagcgaagaaa ggaggtcagtccttcttgatctcaatttacaatgagcaagggatccagcaaattggtgtg gagatgggtagatctcctgtattcctgtatgaagaccatacaggaaagccaggcccagaa gactatcctctctttagaggcattaacctagcagacggcaagtggcacagagtagctatc agtgtgcagaagaaaaatgtcaccttgattttggactgtaaaaagaagataaccaagttc ttggaccgaagtgaccatcccatcattgacgtcaatggcatcattgtatttggaacaagg atattggatgaggaagtatttgagggcgacatccagcagctcctgctcctggcagacccc cgagcagcccacgattactgcgaacactacagccccgactgcgacaccgccatccctgac tccccccagtcccaggaccccaaccaggatgaatactacaccgatggggagggagaaggt gacacctactactatgagtatccctactatgaagatgttgatgaagctgtaaagccagaa gcacccaccagcaaacctggcactcctgaagtggctgctggagagagacctgaaaccaag caggactatcctgcccccacgccgtcgcctgatggaggggaccccggcaagcggacgaaa ggggatgctgtggtggatgaccccctcgtggatgagtacaactatgaaaccattaacgaa gagtacttcacgcctctcccctacgaagatgtcaactacaatgaagaagtagacccccag ggcgggctcactgaaaacactgtggaagctgaactccccacgagtaccgtcatcacctac aatgagaccgatgctgctcaaggaggagacgacctggataaagatttcactgaagaaaca ataaaagaatatgatgggaattattatgataactattatgaccgaacagcgtctcctgat attggccccggcatgcctgctaaccaggacaccatctacgaagggatcggtggcccacgg ggtgagaaaggacagaagggggagcctgcgattattgagccgggtatgctggtggaaggc ccacctggtcccgaaggcccagcaggccttccaggacctccaggaccaactggacctgtg ggcttaatgggtgaccctggggagagaggaccacctggtcgcccaggtcttccaggagca gatggtttaccaggaccaccagggacaatgcttatgttgcctttccgctttagtggagga ggagatgctggctctaaaggacctctcgtttcagcccaggaggcccaagcccaagccatc ctgcagcaggcaaggctggcgctgagaggaccagcgggtccaatgggtctgacggggcgg ccgggccccatgggacccccgggcagtggaggactaaagggagaagctggagatatggga cctcagggtccacgaggcatccagggtcctcctggtccggcaggaaaaccaggccgcagg ggacgagctggcagtgacggtgcccggggaatgccaggccagacaggaccgaagggtgac cgagggtttgatggcttggctggtttgcctggtgagaagggaaatagaggtgagccaggc ccccacggacccccaggggcacccggagaggatggggagaggggagatgatggagaagtt ggacccagaggtctacctggagaacctggaccccgaggactgctgggaccgaaagggccg ccgggacctccggggccaccgggtgtggctggtatggatggacaaacaggtcccaagggg aatgtgggtcctcaaggtgagccgggtcccccgggacagcagggtaacccaggtgctcag ggtcttccaggtccacaaggcgcgattggtcccccaggagagaaagggccgctgggcaag cccggtcttcctggcatgcctggtgcagatggtcctccgggtcatccaggcaaggaaggt cctcctggagagaaggggagtcagggtccaccaggtcctcagggccccatcggttatcca ggaccacgcggagtcaagggagcagatggtgttcgtggattgaaaggcaccaaaggtgaa aagggtgaagatggcttccctggcttcaaaggtgatatgggcatcaaaggagaccggggg gaaattggacctcctggcccccgaggtgaagatggtcctgaaggtcccaaaggtcgctct ggccccaatggagatcctggtcctcttggtcctgctggagagaagggaaaactcggcgtg ccaggactgcccggctacccgggcaggcagggcccaaagggctcgatcggcttcccagga tttccaggagccaacggagagaagggcacacgggggacacctggcaaaccaggtccaagg gggcagcgcggtccaacgggtccacgtggggaaagaggccctaggggaagcactgggaaa cccggcccaaagggcaactctggtggtgatggcccccctggtcctcctggcgaaagggga ccaccagggcctcaaggaccgactggatttcctggaccaaaaggcccccctggtcctcct gggaaggatggattgcctggtcaccccggacagagaggagaaactggtttccaaggcaag accggccctccaggacctcccggtgtcgtaggccctcagggtccaactggtgagactgga ccaatgggtgagcggggacatccaggccctccaggtcccccaggtgaacaaggtcttcct ggcctcactggaaaagaagggaccaagggggaccctggtcccgccggcctcccagggaag gacggtcccccgggcttgcgaggcttccctggagagagaggtctccctggccccattggt gctccagggctgaaaggcaacgaaggtcccccaggccccccaggtccagcaggctctccc ggcgagcgtggtcccgcaggatcagccggcccgataggcttgccagggcgacctggcccc cagggacctccaggaccctcaggtgaaaagggagccccaggcgagaagggtcctcaagga ccggctggccgggatggcatccagggcccggtgggactcccaggtccagcaggtcctgtc ggcccccccggagaggatggagacaagggcgagattggggagcctggccagaagggcagc aagggcgacaaaggagagcagggtccaccaggtcctaccggccctcagggtccaatcggt cagcctggcccagctggtgccgatggagagccaggtcccaggggacagcaaggcctcttt ggtcagaaaggtgatgaaggaccccgaggtttccctggtcccccaggcccagtcggcttg cagggcttgcctggaccgcccggtgagaagggggaaaccggtgacgttgggcagatgggc ccgcctggcccacctggacccagaggtccatctggaccaccgggagcagacggtccacag ggtcctcccgggggaataggaaatcctggtgcagtaggagagaagggtgaacctggtgaa tctggtgagcctggtcttcccggcgaggttggcctcccaggtcctaaaggtgaaagaggt gaaaagggtgaagcaggtccctctggtgctgctggtccacctggccccaaaggtccacca ggtgatgacggtcccaaaggcagccctggtccagttggtttccctggtgaccctggtcct cctggagaacctggtccagctggtcaagatggtccccctggtgacaaaggtgatgatggc gaacctggacagactggttcccctggtcccacgggagagccaggcccctccggaccccca gggaaaaggggccctcctggtccagccggtcctgaaggaaggcaaggagagaaaggagcc aagggtgaagctggtttggaaggacctcctgggaagactggcccaattggtccccaaggt gctccagggaagcccggccccgatggccttcgaggaattcctggtccagtcggtgaacaa ggtctcccaggatcccctggcccagatggtcctccaggcccaatgggcccaccgggtttg cctggtcttaaaggagactctggtcctaaaggggagaagggtcatccaggtttaattggt cttattggaccaccgggagagcagggagaaaagggcgacagaggtctcccaggcccccag ggctcagcaggacccaaaggagagcagggtatcacgggtccttctggaccaatcggacct ccagggccaccaggattaccgggtccacctggtcccaaaggtgctaaaggatcatcaggt ccaacaggtccaaagggtgaatcgggtcttcctgggcccccagggcctcctggtcctcct ggagaagtcatccagccactgcccatccagtcttccaagaggaccaggcgaaacattgac gccagccagctggtggacgatggaaatgccgacaactacatggactatgcagatggcatg gaggaaatttttggctcgctgaattccttgaaactggaaattgagcaaatgaagcatcca ttgggcactcaacataacccagcacgtacctgcaaggatctgcagctctgtcaccccgat ttcccagacggtgaatactgggttgatcctaaccaaggatgttccagggactctttcaaa gtttactgtaatttcacagctggtggagagacttgcatcttccctgataagaaatctgaa ggagctagaattacttcttggccaaaggagaacccaggctcctggttcagtgaattcaag cgcggtaaactgctctcctacgtggattcagacgggaaccccatcggagtggtgcagatg acttttctccgactcctgagcgcttcggcccaccagaacatcacttacaactgctaccag tccgtagcctggcacgaagccaccaccaacagctacgacaaggccatccgcttcctgggc tctaacgacgaggagatgtcctacgacaacaacccctacatccgagccgccctcgacggc tgcgcggcaaagaagggctatcagaagactatcctggaaatcaacacgcccaaagtagag caagtacctatagtcgacatcatgttcaatgacttcggagaagcgtcacagaaatttgga ttcgaggtgggaccagcttgcttcatgggctaa

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