KEGG   Pygoscelis adeliae (Adelie penguin): 103915657
Entry
103915657         CDS       T06012                                 
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
padl  Pygoscelis adeliae (Adelie penguin)
Pathway
padl04510  Focal adhesion
padl04512  ECM-receptor interaction
padl04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:padl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103915657 (COL4A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103915657 (COL4A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103915657 (COL4A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:padl04147]
    103915657 (COL4A1)
   00536 Glycosaminoglycan binding proteins [BR:padl00536]
    103915657 (COL4A1)
Exosome [BR:padl04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   103915657 (COL4A1)
Glycosaminoglycan binding proteins [BR:padl00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103915657 (COL4A1)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 103915657
NCBI-ProteinID: XP_009320806
LinkDB
Position
Unknown
AA seq 1651 aa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NT seq 4956 nt   +upstreamnt  +downstreamnt
atggggacgggttgttccggttgtggaaaatgtgactgcagtggagtaaaagggcaaaag
ggagaaagaggcttgcctggactacagggtgtgattgggtttcctggaatgcaaggacct
gaaggtcctcctgggccaccagggcttaagggtgatactggagaaccaggactgccagga
acgaagggaacaagaggccccccaggagcatcaggctttccaggaaacccaggccttcct
gtcattcctggacaagatggccctcctggtccacctggcattccaggatgtaatggcaca
aagggtgaaagaggtccagtaggtcccccaggtttaccaggactgactgggagcatagga
cccccaggacctcctggaatgaagggagatccaggtgaagtgattggtcttttacctcct
agtgtgctaaaaggtgataaaggctttcctggccaacctggactacctggtccacctgga
actccagggtttcagggaccaatggggccacaaggtcctccaggagagccaggtccccca
gggccaccaggactcccaggcgagaagggctacatggggttgggctttcagggtcccaaa
ggtgaaaagggagaacaaggggtacggggccccccaggccccccaggaccagcaccacat
gtgaaagaaaaagggagtgaaatcataaggggagaaaagggtgatccaggtgaaaagggt
gaacagggaaccccaggattgccaggttcaggtttcaaaggagaaaagggtgaacctggg
aagcctggtccacgtggaaagcctggaaaagatggtgaaccaggaccaaaaggagaaccc
ggtttgcctggtggatttgggattccaggacgacccggggaggctggtacgaagggtgac
aaaggtgaacaaggttttccaggacctccaggaagagttatagatactggaccagtagat
acctttggtgaaaaaggagagcctggagtttcaggtttgcctggactaaaaggtcaaaaa
ggtgaaaaaggtttccctggtatacaaggaatcccaggacctccaggtcgaccgcttcca
gacaggataggatctcctggtgtccctggagagagaggtgaaaaaggtgaaaagggttct
ccgggattccctttacccggaccccctggaagagatggtttcccaggtcccccagggttg
cctggcccaccaggtcctccgggcaaaacagatggaattgaccaatgccagcagggagaa
cctggtgcaccaggtagtcctggacctccaggaagagatggatttccaggagagatggga
gagaaaggtgacaaaggcgaatcctgtgccttatgtgataaagtaggaccgcctggactt
ccaggaccacaagggccaccaggtccagcaggttttccaggacaatcaggtttcaagggt
gacagaggcttacctggacttgatggccttccaggggtacctggcccccccggcactcca
ggacttatgggcagccctggggcaaaaggagaaccaggagatttttcttatgattctatc
ctgaaaggtgaaaagggagatcctggtttcccaggacaaccaggtactcctggaagagaa
ggaagaccaggaaaagatggattgccaggtctccagggtccgaaaggagcatcgggtaca
gctggcttgaaaggagaacgtggtccccctggccaacctggattccctggagtacgtggt
gaaagaggctttcctggccctcctgggataggcactgcagggttacccggtgacaaagga
gacagaggctttgctggaaccccaggtttaccaggccttccaggaacaaagggtgaagca
ggacgaactgtaccactccctggacctcctggggcagatggccttcctgggccacctggt
ttccctggaccccaaggtgacaaagggaatcctgggcttccaggtagacccggcctgcca
ggagaaaaaggtgctgttgggcagccaggtatagggttccctggacctccaggacccaaa
ggtttccaaggtcagcctggctcgcctggtcttccggggactccgggaacccctggcctg
gatggtttgccaggtgtaccaggcttacaaggtcaaaaaggtgaacctggtgtaggtctc
cctggccctaagggattgccgggccccccaggcccagctggcatccctggagaaaaggga
agttcaggactgcctggcttacgtggcgagcaagggtttccgggcatacctgggcagcaa
ggattcagaggcgaccccggcctcccaggactgcaaggcttgcaaggccctccgggcgca
ccagggctgggcccgcagggatcaccgggacccgctgggcagccgggaccccagggacca
ccaggatttcctggaataaaaggagaaaggggcttccctggtatcccaggtctagatatg
ccaggaccaaaaggggataaaggtagccagggccagcccggagtaccagggtctgtgggg
ttacccggcctgccaggtccgcagggggctgttggactgaaaggatcggcaggaaccaaa
ggagaaatgggagttatgggaactcctggtttgccaggaactcctggaccaattggagat
cgagggttgcctggtgaaaaaggtagccaaggtttcaaaggtgtagttggaccacagggt
gatcctggtgtcaaaggagataaaggtgaagctggtctcccaggaaaacctggaacgatg
gacaatatggacatggttagtcttaaaggccaaaagggagatcaaggagaaaaaggggac
catggagcaacaggagaaaaagggttacgtggggaatatggagaaccaggaattccaggg
aaggatggtgaacctggtactccaggacatccaggaccaaaaggtgatcagggcccccca
gggtacccaggggatccaggaattccaggacaaaaaggatcagttggtgaaatgggtttg
ccaggaacacctggagaaaagggtctgccaggagtaccaggttcaccaggcacaccaggg
ttccctgggcaaaaaggtgaaaaaggagacaaaggagcaccaggttttcctggaattggc
tttccagggtctcctggtgagaagggagaaccaggaagaacgggtagtccaggtttatct
ggagataagggtgaaaagggtagtgcagggattcctggaatgccgggtgccccaggtccc
aaaggatcccctggcatggcaggatttccagggagccccggccgccatggagaaaagggt
gaaaaaggacttcctggcttaagtggcattccaggtttaaaaggagaaccaggtgaacct
ggcgttccgggtcctgctggttccattggacagaaaggtgaaccaggttatgatgggatt
ccaggtgcagctggtgcaaagggtgaacaaggtattccaggtagaggacttccaggattt
cccggtgcaaagggagataaaggtgcgaaaggtgatgtgggttttccaggatccccagga
agtccggggatcccaggcttgaaaggagaaccaggatatgctggtccaccaggccctaag
ggcagccaaggtcttcctggactaccaggaagtgcaattgagggccctaaaggagacaga
ggtccccaaggccaacctggccttccaggtttaccaggtccaacagggccaccaggaacc
ccaggtctgaaaggggccaaaggagagcagggaagcaatggctggcctgggactcctggg
ggtcagggagtcaaaggcgatccgggtttccagggactgccaggtagtcctggtttacca
ggagatattggtcaaaagggtgatctgggacccccaggagttccaggcgttccaggtcca
aaaggatctcctggcttcccaggccttaagggtgagcgaggtgaccaaggtcttcctgga
tctaaaggtttacaaggcccaccaggcccaccaggtgcttttcagcttgttaaaggggat
cctggcttacctggccctgtaggaccggttggcctcaagggattcccaggacttccaggt
cccaaaggacagcaaggggtgacaggaccttcaggtgtacctggaccacctggtagtcca
gggtttgatggtaaacctgggcaaaaaggagaagttggtccttatggtcccccagggccc
agaggattccctggtccacctggccctgaaggtttgcctggggctatgggcccaccaggt
gcaccgtctgttgctcatggcttccttgttaccagacacagtcaaaccaccgaagaacca
tcatgtccatttggaacaaggctgatttaccatggctactccttgctttatgtacaaggc
aatgaaagagcacatggccaagatctgggcacggcaggaagctgtcttcgtaaatttagt
accatgcctttcttattctgcaatatcaacaacgtatgtaactttgcatcaaggaatgac
tattcctactggctgtccacgcctgaacccatgccaatgagtatggctcctatcactggt
gataatatcagaccattcatcagcagatgctctgtgtgtgaagctcctgctatggtaata
gccgttcacagtcaaacaattcaaataccgccgtgtcctgaaggctggagttcactttgg
attggttactcctttgtcatgcacaccagtgctggtgcggagggctctggccaggccctg
gcgtctcctggttcctgcctagaggagtttcgcagcgctcccttcattgaatgccatggc
cggggcacctgcaattattatgcaaatgcttacagcttctggcttgccactatagagagg
aatgagatgttcaagaaaccgactccctcaactttgaaagcaggggatctgcgctcaaat
gttagccgttgtcaagtctgtatgagaaaaacataa

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