Pygoscelis adeliae (Adelie penguin): 103916186
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Entry
103916186 CDS
T06012
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103916186 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
padl03021
]
103916186 (SMARCC1)
03036 Chromosome and associated proteins [BR:
padl03036
]
103916186 (SMARCC1)
Transcription machinery [BR:
padl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103916186 (SMARCC1)
Chromosome and associated proteins [BR:
padl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103916186 (SMARCC1)
PBAF complex
103916186 (SMARCC1)
GBAF(ncBAF) complex
103916186 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
SWIRM-assoc_2
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
BRCT_2
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
103916186
NCBI-ProteinID:
XP_009321416
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPT
IYLIPDIELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSMDDDEWLRPVMKKDKQV
LVHWGFFPDSYDTWVHANEIDAEIEDPPIPEKPWKVHAKWILDTDIFNEWMNEEDYEVDE
NRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAA
LYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDE
QDEETVATGGKEDEDPNKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRA
LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLE
QWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTPQVPAAQQMLSFPEKNK
EKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEP
EKIDGAEEEKMETETDGQQSEKVENKAESEIEEGDKVQEGENERNPEKEQDSEGTADTKP
EKEAEENKENVDASKDKENEAGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERK
IKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAE
LRARQQMEQQHSQNPQQSHQHSSGPGMNPLGAPAHPGLLPHQQPPPYPMMHHQMPPPHPP
QPGQMPGPGSMIPGQPMPGRMMPSVSANIHPAGAGPPPPGMSPMSGNLIGPRVPLAAPNG
MYPPPAQPPPPAEGVTPPPAGAPPASAAP
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaagctggaggtacattatgtcacattcttggtgctgcttacaaatataag
aatgaacagggctggcggaggtttgacctgcagaatccatcccgaatggatcgaaatgtg
gagatgttcatgaacattgagaaaacactagtgcagaacaattgtctgagcagaccgacc
atctacctcattccagatatagaattgaagttggctaataaattgaaggatattgtcaaa
cgtcaccagggaacagtaactgaagagaaatcaaaggctacccaccacgtctatccaagt
cctacctcaatggatgacgatgaatggttgagacctgtgatgaaaaaagacaagcaggtg
ctggtacactggggcttttttccagacagctatgacacttgggttcatgccaatgaaata
gatgctgaaattgaggatcctccaattcctgaaaagccatggaaggttcatgccaagtgg
attttggacacagatatattcaatgaatggatgaatgaagaggattatgaggtagatgag
aacaggaaatcagtgagttttcgacagagaatctccatgaaaaatgaagagcctgtacgt
agtccggagaggagagacaggaaagcagcagcaagtacaaggaagagaaagcattctcct
tctccacccccgactcctgtggagtcgagaaaaaagacagggaagaaaggacaagcagcc
ttatatgggaaaaggagagggcagaaagaagaagatgagcaagaagatcttacaaaggat
atggaggatcccacaccagtacctaatatagaagaagtggtacttcccaaaaatgtgaac
ccaaagaaagacagtgaaaacacgccagtgaaaggaggaacagtagcagacctcgatgaa
caggatgaggagacagtggcgactggaggaaaggaagatgaagatcctaacaaaggcgat
cagagtcggtcaattgatccaggtgaagataatgtcacagaacaaaccaaccacatcatt
attccaagctatgcatcttggtttgactacaactgtattcatgtgattgaacgtcgtgct
cttcctgaattcttcaatggaaaaaacaagtccaagactccagaaatatacctggcttac
cgcaacttcatgattgacacctatcgcttaaaccctcaagagtacttgaccagcactgcc
tgcagaagaaatctgaccggagatgtgtgcgctgtcatgagagtacatgcttttctggag
cagtggggtctcattaactaccaagtggatccagaaagccgtcccatggcaatgggacct
ccccctactcctcacttcaatgtgctggctgatacaccctctggacttatgcctctccat
atccgcactccgcaggttccagctgctcagcagatgttgagttttcctgagaaaaacaaa
gagaagcctactgatctgcagaactttggacttcgcacagacatttactcaaaaaagact
ttagcaaagagtaaaggtgcaagtgctggaagagaatggacagaacaagagacattgctg
ctattagaagctctggagatgtacaaagatgactggaacaaagtctcagagcatgttggg
agccgtacccaagatgagtgcattctccattttctgagacttccgattgaagacccctat
ttggagaactccgatgcgtctctgggcccgctggcttaccagcccgtacctttcagccaa
tctggcaatccagtgatgagtaccgttgcttttctggcatcggtggtggatccccgggtg
gcatcagccgcagcgaaggccgcgttagaggagttttctcgagtcagagaggaggtaccg
ctggagcttgttgaagctcatgtaaagaaagtacaagaagcagcaagagcctctgggaag
gtggatccaacatacggactagagagcagctgcattgctggaacaggtccagatgagcca
gagaaaatcgatggagctgaagaagaaaaaatggaaactgagacagatgggcaacaatct
gagaaggttgaaaacaaagcggagagtgaaattgaggaaggcgataaagtacaagaagga
gaaaatgagagaaatccagaaaaagagcaagatagcgaagggactgcagacaccaagcca
gaaaaggaggcagaagagaacaaggagaacgttgatgcaagcaaagacaaagaaaacgag
gctgggaagaagaaagtggaacatgaaatttcggaaggaaacgtagctacagctgcagct
gctgcccttgcctcagctgccaccaaagcaaagcacctagcagcagtggaagaaagaaag
atcaagtccctggtcgcccttctggtggaaacgcagatgaagaagctggagataaaactt
cgccattttgaggagttggaaaccattatggacagagagaaagaggcattagagcagcag
agacagcagttgctgacagaacgccagaattttcacatggaacagctgaaatatgctgaa
ttaagggctcgtcagcaaatggagcagcagcacagtcaaaacccacagcagtctcaccag
cactccagtgggcctgggatgaacccccttggggcaccagcacatccaggcttactgcct
catcagcagcccccaccgtaccccatgatgcaccatcaaatgccaccacctcacccacca
cagccaggtcagatgccggggccgggatcaatgatacctggacagcccatgccaggccgg
atgatgccaagtgtgtcagccaacatccatccagctggcgctggtccccccccacctggc
atgtcaccgatgtcaggaaatctaattggacctcgcgttcctctagcagctccaaatggc
atgtatccccctcctgcacagccgcctccgccagcagaaggggtgaccccacctccggca
ggagccccgccggcctcagccgctccgtaa
DBGET
integrated database retrieval system
