Pygoscelis adeliae (Adelie penguin): 103917158
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Entry
103917158 CDS
T06012
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103917158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
padl03019
]
103917158
Messenger RNA biogenesis [BR:
padl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103917158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
103917158
NCBI-ProteinID:
XP_009322542
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MDPSHTRTTKRRDTSKVEEKLDILEESKGDIHIARQRCDDTTGKQEDGPISGHAESSHPL
QDAPQENRPVSSEDREMSQHALPSGEDDEDDSDSDSDDDDVKVTIGNIKTGAPSYMGTPM
NLNLKTGRGYGASASAKLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYF
NYGFNEETWKAYCEKQRRLQLGLDPAPPISTENKITVQQGRTGNAEKEVENNIIKTEFKT
DFLALVGGRMKAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGS
KPQPPQQPQQPSQPHQPPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPG
LPPPGPIPGLFPPPLAPPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSH
TPWVTTVDKGTSSSSSSHWEYSGSRRERERERERERERERDRDRTPTTSEYNNDDERYRY
YSRERSYDFERDYRRSRDRSREREDRHRERRHRDKEESSKHKSSRRKQHESEEGESHRRH
KHKKNKRSKEEKEASEDGAQEGEEQDAKE
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggatcccagccacactcgaaccacaaagagaagagacacttccaaggttgaagaaaag
cttgatattttagaagagtctaaaggtgacatccatattgccaggcagcgctgtgatgac
actactggtaagcaagaagatggaccaatttctggacatgcagaatcttctcatcctttg
caagatgctcctcaggagaaccggcctgtcagcagtgaagaccgagagatgtcgcaacat
gcccttccaagtggtgaagatgacgaagatgacagcgatagcgacagtgatgatgatgac
gtgaaagttactattggcaacattaaaacgggagcaccgtcgtacatgggaactcctatg
aatctaaacttaaaaacgggtagaggctatggagcatctgcttcagccaagttgcagccc
aaaggtattgacttagatgccgcagggaatataaatggattgcctgttatagaagtggat
ttagattcatttgaagacaaaccatggaggaaaccaggcgctgatctttctgattacttt
aattatggattcaatgaagaaacgtggaaagcttattgtgaaaagcagcgacggcttcag
cttggactggatcctgctcctcccatcagcactgaaaataagatcacggttcagcaagga
agaacaggaaatgctgaaaaagaagtggaaaacaacatcatcaaaacagaattcaaaaca
gacttcttggctctggtgggaggacgcatgaaggctgggcctcctcctaataggaagctg
ggtgggacaattgatgtgatcggcggccaggcaggcacaattaggagagtagaaggaaga
cgtcgcgataagcatgcctccgaggaaaacccaattcaggtccttggagaccacggaagt
aagccacagcccccacagcagccccagcagccatcacagccccaccagccacctcagcaa
cagccgtttgcaccaccagcaggcccaccgcctcccccgctcgctgggccacctccacca
cacttcctccaccctcctccaccagttacttctgttccacctcccctgcatcctccaggt
ctgccaccgcccggtcctattccagggttgttcccgcctcctctggcaccaccaccagct
ctcctcattccaaccttggatggccagccagccagctacaataataggcagcctcctcca
tttggctacaactctgcagattcaggtttcatcagctacccacccatctccacatcccac
acgccctgggtgacgacggtggacaaaggcacaagcagttccagcagcagccattgggaa
tactcaggctcgaggcgcgagagggagcgggaacgtgagcgggaaagggaaagggagaga
gacagagaccgcactccgaccactagtgaatacaacaatgacgacgaacgataccgctac
tacagccgagagcgcagctacgactttgagcgtgactaccgccggagtcgagatcgcagc
agggagcgagaggatcgtcaccgagagcgcaggcacagagacaaagaggagagcagcaag
cataagtcttcaagacgcaagcaacatgagagcgaggagggggagagtcatcggcgtcac
aagcacaaaaagaacaagcggagcaaagaggagaaggaggccagtgaagatggtgcccag
gagggagaggagcaggatgccaaggagtaa
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