Pygoscelis adeliae (Adelie penguin): 103918606
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Entry
103918606 CDS
T06012
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
padl00536
]
103918606 (COL13A1)
Glycosaminoglycan binding proteins [BR:
padl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103918606 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
103918606
NCBI-ProteinID:
XP_009324259
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MLEEKSWKGVGEAAFDRGCVAPPRTGDGERCCRLPLLLGSGLPGVSLLSLVLSLLLYFRT
SDLQSRVSHLEADRPTPLPAWLSADQMETAILGRVDQLLDEKLKFHLPRHREVRDTHQRC
NCPAGPPGPTGRPGLQGDKGAMGIPGRPGLKGQHGEKGAPGEAGMSIIGPRGPPGQPGTR
GFPGFPGPIGLDGKPGHPGQKGEMGAAGPRGQPGPPGQKGEKGQCAEYPHRLLPLLNSVR
LAPPPVIKRRTFQGEQGQAGIQGPPGPPGPPGPTGPAGPGGTPGQPGPVGPPGRAGEPGK
PGRDGRGLPGPPGPKGDPGIQGYPGRKGEKGRAGDPGLPGLPGTKGEKGNAENALEGGKG
EPGPPGLPGPPGPKGEAGDVGRPGAAGSRGEKGEPGSPGDQGPMGPRGPKGEPGKDEMMD
YDGNISEALQEIRTLALMGPPGLPGVAGPPGPPGQKGEIGLPGPPGHDGEKGPRGKPGEM
GPPGPHGLPGKDGPPGIKGEPGHIGVTGEKGDKGEPGQAGSPGLDGPTGEKGERGDQGMP
GPSGLPGPIGLPGLTGEKGEPGEHGDKGNPGESISGPPGPQGPPGPPGLQGLPGPKGEAG
IDGMKGEKGAQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVSGPAGPKGERGSKGDPG
VVGPMGPAGLPGLQGLPGDKGIRGERGKKGSRGSKGDKGDQGAPGLDAPCPLGEDGLPVQ
GCWNKVK
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggagaagagctggaaaggtgtcggtgaagcagcttttgacagggggtgtgtg
gctccccccaggaccggcgacggggagagatgctgccgcctccctctcctgctgggctcg
gggctgcccggcgtctccctgctttctctggtgctgagcctcctgctgtactttcggacc
tccgatctgcagtcccgggtgtcccacttggaagcagacagacccacaccgctccctgcc
tggctctcagcagaccaaatggagacagctattttgggaagagttgaccaactgcttgac
gagaaattaaagttccacttgccgagacatcgagaagttcgagacacacaccagcgatgc
aactgcccggcaggcccacctggccctacaggaagaccagggctccagggagacaaaggt
gcaatggggatccctgggcggccgggactaaaagggcaacacggagagaagggtgctcca
ggagaagcgggcatgtctatcatcgggccccgcggtccacccggacagcctggaacaaga
ggttttcctggattcccgggccctattggcttggatggcaaaccgggtcatcctggacag
aagggggagatgggtgctgcaggtcccaggggacaacctggacccccaggacaaaaagga
gaaaagggtcagtgtgcagagtacccacacaggctgttgcctctcctcaattcagtgcgg
ctggctccacctccggtcataaagagacgcactttccagggtgaacaaggacaagcggga
atccaaggtcccccggggccccctggcccgccagggcccactggaccagctggacccgga
ggaaccccaggacagcctgggccagttgggccgcctggcagagcaggagaacctgggaag
cctggcagagatggaaggggcttacctgggcctcctggaccaaagggagaccctgggatt
cagggataccctggcagaaagggtgagaagggacgagctggtgaccctgggcttcctgga
ctccctggcacgaagggagagaaaggaaacgctgagaatgccctggagggaggtaaagga
gaacctggccctccaggtctgcccgggccccctggaccaaagggagaagctggtgatgtt
ggccggcctggtgctgcagggtcacggggggaaaagggggaacctggttcaccgggggac
cagggacccatgggcccaaggggccccaaaggagagcctgggaaggatgaaatgatggac
tatgatggtaacatcagtgaagctctccaggaaatacgaactttggccttgatgggaccc
ccaggacttccaggtgtggctggacctccagggccaccaggacagaagggtgaaattggc
ttgccaggtcctccaggccatgatggagaaaagggaccacgtggcaagcctggagaaatg
ggcccccctggccctcatggactgccgggaaaggatggaccacctggaataaagggagag
ccaggccatattggggttacaggagaaaagggcgataaaggagaaccaggacaagccggc
tcaccaggtcttgatggccccactggagagaaaggtgaacgaggtgaccaagggatgcca
ggaccatcaggattgccgggtcccattggacttccaggattgacaggagagaagggcgag
cctggggagcatggagacaaaggaaatccaggagaatcgatatctggcccccctggaccc
caaggcccaccaggacctccaggtcttcagggcctcccaggaccgaagggggaagcaggg
attgatggaatgaaaggagagaagggtgcccagggtgaaaaaggagacagagggccactg
ggattacctggtgcttcaggtttagacggcaggcctggaccaccgggtactccaggacca
attggggtttcgggaccagcaggaccaaaaggagaaaggggcagtaaaggagatcctgga
gttgtaggaccaatggggccggcaggacttcctggtttacaaggtctacctggtgacaaa
ggaatccggggggagaggggcaagaaaggctctagagggtctaaaggggataagggagac
caaggagcgcctggattagatgcaccctgtccgttgggggaggacggccttccagttcaa
ggctgctggaataaggtaaaataa
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