Pygoscelis adeliae (Adelie penguin): 103920038
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Entry
103920038 CDS
T06012
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03015
mRNA surveillance pathway
padl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103920038 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103920038 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
padl03019
]
103920038 (CPSF6)
Messenger RNA biogenesis [BR:
padl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
103920038 (CPSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
103920038
NCBI-ProteinID:
XP_009325948
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MKPLLKEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDSLPPSVGDDVGKGAAPNVVY
TYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSE
ASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGSSR
AAFPPSNRGRGRFPGAIPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPP
PGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQ
GPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPANSGIPTSD
SRGPPPTDPYGRPPPYDRGDYGPPGREMDAARTPLSEAEFEEIMNRNRAISSSAISRAVS
DASAGDYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRER
SRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccttacttaaggaagctgaatatggtggacatgatcagattgatttatatgat
gatgtaatttctccatctgcaaataatggagatgccccagaagatcgtgattacatggat
tctctcccaccatctgttggggatgatgtaggtaaaggagctgcaccaaatgttgtctat
acatatactggaaagagaattgccttgtacattggaaatcttacttggtggacaacagat
gaagacttaactgaagcagttcattcactgggggtaaatgatattttggagataaaattt
tttgaaaatcgtgctaatggccagtctaaagggtttgcccttgtgggtgtgggatcggaa
gcatcctccaaaaagttgatggatttgttgcctaaaagagaattgcatgggcagaatcct
gttgtaactccatgcaataaacaatttctgagtcagtttgaaatgcagtcaaggaaaacc
acacagtctggccagatgtctggggaaggtaaagctggtcccccaggaggaagctcacga
gcagcatttccacctagtaatagagggcgaggccgttttccaggtgccattccaggtgga
gacagattccctggaccggcggggccaggcgggccaccaccacctttcccagctggacaa
actcccccacgtccacctttaggtcctcctggcccgccaggcccaccaggccctccacct
cctggtcaggtcctcccacctccattagctggacctcctaatcgtggtgaccgtccacca
ccaccagttctgtttccaggacagccttttggtcagcctccacttgggccacttcctcca
ggccctccaccaccagttccaggctatggaccaccaccaggtccgccaccacctcagcag
ggtccacctccacctccgggtccatttccccctcgtccgcctggccctcttgggccaccc
ctgactcttgctcctcctccacatctccctgggccacctccaggtgctccaccacctgca
ccacatgtgaatccagctttcttccccccacctgccaatagtggcatacctacatcagac
agccgtggcccacctccgacagatccgtatggccgacctccaccatatgacagaggtgac
tatgggccacctggaagagaaatggatgctgcaaggacacctctaagtgaagcagaattt
gaagaaatcatgaatagaaatagggcgatctcaagcagtgccatttcgagagctgtatca
gatgccagtgctggggactatggaagtgctatagagaccttggtaactgcaatttcctta
attaaacagtccaaagtatctgcggatgatcgctgtaaagtacttattagctctcttcag
gactgccttcatggaattgagtccaagtcttatggttctggatccagaagacgtgagcga
tccagagagagggaccatagtaggtcacgagaaaaaagtaggcgccacaaatcacgtagt
agagatcgtcacgatgactattaccgggaaagaagccgtgagagagagaggcatcgtgat
cgcgacagagatcgtgacagagaacgagacagagagagagaatatcgtcatcgttaa
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