Pygoscelis adeliae (Adelie penguin): 103920153
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Entry
103920153 CDS
T06012
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl04510
Focal adhesion
padl04512
ECM-receptor interaction
padl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103920153 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103920153 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103920153 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
padl04147
]
103920153 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
padl00536
]
103920153 (COL4A5)
Exosome [BR:
padl04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103920153 (COL4A5)
Glycosaminoglycan binding proteins [BR:
padl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103920153 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103920153
NCBI-ProteinID:
XP_009326101
LinkDB
All DBs
Position
Unknown
AA seq
1668 aa
AA seq
DB search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NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaaggcttgccatggatgtacatctttatccaaatgtgattgcagtggagta
aaaggtgaaaagggtgaaagaggattcccaggcttggaaggacagccaggtttgcctgga
tttccaggacctgaaggaccacctggtccaagaggctcaaagggtgatgatggacttcca
gggcctattggacccaaaggaatcagaggaccgccagggcttccaggatttccaggaaca
ccaggacttcctggattaccaggacaagatgggccaccaggacctcagggtatcccagga
tgcaatggaacaaagggagagcgtggattcccaggcagtccaggttttcctggtttacaa
ggacctcctggaccccctggtctgccaggtatgaagggtgaagccggtgaaataattaca
tccttgctgccaggacagaagggcgacccaggatttccaggtcttccagggatacctggc
ccacccggctccgtgggaataccaggtccaattggccctccagggcccccaggtttgaca
ggacctcctggtccaccagggctgccaggacctaagggtaatatgggtttgaatttccaa
ggacccaaaggtgaaaaaggtgaacaaggtcttcagggacctccagggccaccaggacaa
attggagaacagaagagaccaaacgacattgagtttcagaaaggagatcagggtattcca
ggtgatccaggcccaccaggacttcctgggccacaaggccctcctggtcttcccggtggc
gtaaaaggtgaaaaaggtgagcaaggagaaccaggcaaaagaggaaagcctggcaaagat
ggagaacctggtcatcctggtagggatggtttacctggtgggcctggaataagtggtgct
ccaggaagagagggtgaaaagggtgaaaaaggtgacgttggtccccctggtcctcctgga
attgtcatttcaagaccaggcattggtgcaacagtgggaccaaaaggtagcaaaggattg
ccaggacttccaggagccaaaggggagcgtggattctctggtaggccaggcccacctggc
ttgccaggttctccagggatcactactgttggacctcctggcccacctggcttacctggt
gagagaggacagaagggagatccaggtttacctggtgtttctattcctgggcaaccagga
cttgatggaccacaaggacctccaggaccaccaggtcccccagggccacctgcaccatct
gttcctcctggtgaagggttatgtgagccggggccgccaggtcctccaggaattccagga
caacaaggctttacaggggagcgaggccaaaaaggtgatcaaggagacacatgcttcaat
tgcataggaactggaataactgggcctcctggggagagaggaccaccaggagctccaggt
agtccaggttctcctggttttcctggaccaaaaggtgaaaagggccttcctggattaact
ggccttgtagggccaccaggattcccagggtccccaggtgctcctgggagacctggtcct
aaaggagacccaggggatgtcctgactgctccaagaatgaaaggtgacaaaggagaccct
ggcttcccaggacctccaggtcttcctggcatagatggcactcctggacgagatggactg
ccaggtctacctggccctaagggggaacctggcagtgttgcattcaaaggagaaatgggt
attccaggtgatccaggaataccaggtcttcctggagacaaaggacttcctggacctcct
ggttttggtccacaaggttcacctggtgaaaagggcatccaaggtgtatcaggccgtcca
gggcctcctggagttcctggtccaaaaggtgaccctggccagactattacagaaccagga
gttcctggcccccctggtcctccaggaagaaatggtgacccaggtcttccaggagatcct
ggtcagccaggtcagcgtggcttatcgggcataccaggtgcaaagggagagccgggtatt
cctggcattggacttccaggtccaccaggcccaaaaggtttcccagggactccaggcccc
cccggagctccgggaagtccaggtcaccctggtctagatggacctcctggaccacctggt
ttcccaggacagaagggggatcgtggatttggagttccaggaccacctggacccccagga
ccaccaggcacaaaaggagttcaaggacctaaaggtgatcctggcttcccaggaaaccct
ggtctcccaggacgggcaggttttgatggaagtccggggcccaaaggtgaccctggacca
agtggaccaccaggactcccaggcccaccaggcatccctggcattggtggtcaaggacca
cctggatctccaggacctccaggtcctgttggccccccagggttgcagggcgttccaggg
gagaaaggggatccaggtcctccaggcttcgatgttcctggtcctccaggtgaccgagga
accccaggatatccaggaccccctggtctcccagggcctcagggttcacctggaccacct
ggccgggatggaatacctggatttccaggtgccaaaggtgagatgggcgtcatgggagct
cctggtccgccagggcctccaggaactcctggaagaaatggtctgcctggcttgaaaggt
aataatggattacctggtccgccagggcctcctggaccagtaggacagaaaggtatcaaa
ggtgaagcaggcctgccaggtccacctggaaaagttgatctgaaacagctaggagcaaaa
ggagaaaaaggcgagccaggtgttccaggtattcctggtttatcaggacagaaaggttat
caaggtctcccaggtgacccaggcccaccgggacttagtggcccaccaggtgtgccagga
ttgccaggcagcaagggagagacggggcttcctgggcagcctggaccaacaggacctcca
gggttaaaaggtgccatgggagagatgggccttccaggtccgccagggattaaaggcagc
caaggaatagcaggacgtccagggcagcctggacctgcaggatttcctggattgaaaggc
gagaaaggtgaccccggtctttcaagcatcggtattcctggtctccctggaccaaagggt
gatcttggtttgcctggatacccagggagtccaggcagtaaaggtatagctggaaatcct
ggtttgcctggatttccaggcagtccaggtgcaaaaggagaaccaggccttcctggattc
ccaggaacaccaggaattccaggaccaaaaggtattgaggggcctccaggtaatcctggc
ctgcctggaccacctgggccagtaggtgatattggtcgtcctggccctcctggtccttca
ggggagaagggacagcctggtcgagatggtatccctggtccagctggtcagaagggcgaa
ccaggtctaccaggttttgggcgcccaggacctccaggactcccaggattgtcagggcaa
aaaggagatctgggtttacctggcccaccagggccccctggacttccaggtctgaaggga
gaaccaggtttccagggattccctggtctacagggtcctccaggtccaccaggattacca
gggccacctctggaaggtcctaaaggtagccctggcccaccaggtgttccaggaaggcca
ggtccctcaggtcttccaggtccaccgggcccagaaggtccacgagggccaccaggcagt
ggaggacttaaaggagaaaaagggaacccgggtcaacctggcccacctggcctgactggt
caaaagggagatcaaggaccacctggacgccagggggatcctggtcgtccaggtctgaat
ggaatgaagggcgaccccggggttccaggcgtcccaggattcccaggtatgaagggtccc
actggacctgcaggacccgctggccccacaggcagtcaaggactgccaggcccaccaggt
ccaccaggtttaccaggtaccattggacgaagcattgttgtcaaaggtgaccctggtccc
ccgggtcctccaggacagcctgggtcgacagggccacctggattgccagggccacagggc
ttgccaggtccaattggtcttcctggtgacccagggcgagatggactacctggttttgat
ggtccagcaggacgtaaaggagagagaggtcttccaggccagacaggttcacgaggaata
cagggacctcctggtcctgatggcttacaaggcccacccggtcctcctggaacagcttct
gttgctcatggattccttataactcggcacagccagaccagggatacaccactatgtcca
caaggaacatcaagaatatatgatggattctctcttctatatgtgcaaggaaatgagaga
gcacatggccaggatttgggtactgctgggagctgtcttagacgtttcagcaccatgccc
ttcatgttctgcaacatcaacaatgtttgtagttttgcatcaaggaatgactattcctac
tggctatcaactccagagccagtgccgataagcatggagccactgaccgggcaaagcatc
cagccattcattagccgatgcgttgtgtgtgaagctcctgctatggtgatagctgttcac
agtcagaccattcagatcccttcgtgtcctcagggctgggactccctttggattggttac
tctttcatgatgcacactagtgctggagcagagggctctggacaggccttggcatcacct
ggatcctgtttagaagaattccgtgcagctccatttattgaatgccatggtcgtggcact
tgtaattactatgccaattcatatagtttctggctggcaaccgtagaggtgtcagaaatg
ttcagtaaacctcagtcagagacactgaaagctggagacttgaggacgcgtattagtcgt
tgtcaagtttgcatgaagaagacgtaa
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integrated database retrieval system