Pygoscelis adeliae (Adelie penguin): 103921070
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Entry
103921070 CDS
T06012
Symbol
CHD4
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 4
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103921070 (CHD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
padl03036
]
103921070 (CHD4)
Chromosome and associated proteins [BR:
padl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
103921070 (CHD4)
Chromatin remodeling factors
NuRD complex
103921070 (CHD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHDCT2
SNF2-rel_dom
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
HDA2-3
ResIII
PHD_2
DEAD
zf-PHD-like
Motif
Other DBs
NCBI-GeneID:
103921070
NCBI-ProteinID:
XP_009327257
LinkDB
All DBs
Position
Unknown
AA seq
1913 aa
AA seq
DB search
MASGIGSPSPCSGGSDDDEMEILLNNAIPQHPEPEEEPEEELLSEADTPKIKKKKKPKKL
KEPKVPKLSKRQKKELGDSSGEGNEFVEEEEEVLRSDSEGSDYTPGKKKKKKLGPKKEKK
NKAKRKEEEEEEEEDDDSKEPKSSAQLLEDWGMEDIDHIFTEEDYRTLTNYKAFSQFVRP
LIAAKNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESMVTNVDAV
LPQPPVDVPLRKAKTKEGKGPNARRKPKASPRIPDIKKPKTKKVAPLKIKLGGFGSKRKR
SSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLKAGKKKKKGEEDSTVAVDGYE
TDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKED
NSEGEEILEDVVGDAEEEDDHHMEFCRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNG
EWLCPRCTCPALKGKVQKILIWKWGQHPVGPPPPRPPDADPNAPPPKPLEGRPERQFFVK
WQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGEEEKSRKRKNKDPKYA
EMEERFYRYGIKPEWMMIHRILNHSVDKKGNVHYLIKWRDLPYDQASWESEDVDIQDYDL
YKQAYWNHRELMRGEEGRPGKKLKKVKMRKLERPPETPTVDPTVKYDRQPEYLDVTGGTL
HPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLST
IINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFTFEDNAIRGGKKASRMKKEAAVKFH
VLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLX
XXXXXXXXXXXPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSK
TELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAA
MEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHE
GYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWN
PHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSKTGS
MSKQELDDILKFGTEELFKDEATEGGDNKEGEDSSVIHYDDKAIERLLDRNQDETEDTEL
QGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRHHYEQQQEDLA
RNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDEDFDERSEAARRPSRK
GLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMPPQDAFTTQWLVRDLRG
KSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFE
HVNGRWSMPELAEIEENKKLSQPSSPSPKTPTPSTPGDTQPNTPAPVPPPEEGVKVEEGA
SAKEQGESSEPEKELSASATETEVPMECAQPVETPPQEAKSPVNPTEADEKKVEEQEVKE
RPDEPMEVESKADVEKVEDRTPIENPPEPPVITLDEKDEKKDDDKRDVVMLQNGEMLKES
VDERHKKAVKQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAGIIN
HGYARWQDIQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAA
YLNMSEDPTHPSMALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD
MKADVTRLPATIARIPPVAVRLQMSERNILSRLANRSSEPPPPPPPQQVAQQQ
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggcattggatctccgtcgccgtgctcagggggcagcgatgatgatgagatg
gagatcctgttgaacaatgctatcccccagcatccagaacctgaagaagagccagaagaa
gagctgctgtcagaggctgacacccccaaaatcaagaagaagaagaagcccaagaaacta
aaggaacccaaagtgcccaagctcagcaagcgtcagaagaaggagctgggggacagctct
ggtgaagggaatgagtttgtggaggaagaagaggaggttctgcgctctgacagcgagggc
agtgactacactcctgggaagaagaaaaagaagaaattagggcccaagaaggaaaagaaa
aacaaagccaaacgcaaggaggaggaggaagaggaggaagaagatgatgactcaaaggag
ccaaagtcatctgctcagctcctggaagattggggaatggaggatattgatcatatcttc
acagaggaggattaccgcactctcaccaactacaaagctttcagccagtttgtcaggcca
cttattgcagccaagaaccctaaaatagcagtgtcgaagatgatgatggtactgggagcc
aaatggagggagtttagcacaaacaaccccttcaagggaagttcaggagcatctgtggca
gctgctgcagctgcagctgttgcagtagtggagagtatggtgacgaatgtggatgctgtc
ctgccacagccccctgtagatgtgccgctccggaaagccaagacaaaggagggtaaagga
cccaatgcccggcggaagccaaaggcaagtcctcgtattcctgatatcaagaaacctaaa
acaaagaaggtggcacctttgaaaatcaaactgggaggatttggttccaagcgtaaaaga
tcatctagtgaagatgatgatctggatgtggagtcagacttcgatgatgccagcatcaac
agctactctgtttcagatggatctacaagccgtagtagccgcagtcgcaaaaaactcaaa
gctgggaaaaagaaaaagaaaggtgaggaggactctacagtggctgtggatggttatgag
actgatcaccaggactactgtgaggtgtgccagcagggaggagaaataatactgtgtgat
acctgccctcgtgcctaccacatggtttgcctggacccagacatggagaaagccccagag
ggcaaatggagctgcccacactgtgaaaaagagggcattcagtgggaagcaaaggaggat
aactctgaaggtgaggaaatcctggaggatgttgtaggggatgctgaggaagaggatgac
caccatatggagttctgcagagtctgcaaggatggaggagagctgctgtgctgtgatgcc
tgtccttcatcctatcacatccactgcctgaatcccccgttgccagagattcccaatgga
gagtggctgtgtcctcgctgcacttgcccagctttgaaaggaaaggtgcagaagatcttg
atctggaaatggggtcagcatccggttggccccccgcccccacgtccacctgatgcagac
cctaacgctcctccccctaagcctctggagggtcggcctgaaaggcagttctttgtcaaa
tggcagggcatgtcctactggcactgctcttgggtgtcagagttgcagctggagctgcac
tgccaggtcatgtttcgtaactaccaacgcaaaaatgatatggatgagccaccctcaggg
gactttggaggggaagaggagaaaagccgaaagagaaaaaataaggaccccaaatatgct
gagatggaggagcgcttctatcgatacgggatcaagcccgagtggatgatgatccacagg
atccttaatcatagtgtggataagaaggggaatgtccactatctgattaaatggagagac
ctaccctatgaccaggcatcctgggaaagcgaagatgtggatatccaagattatgacctc
tacaagcaagcctactggaatcacagggagctgatgagaggtgaagagggcaggcctggt
aagaagttaaagaaagtgaagatgcggaaactggaaaggccccctgagactcccacagta
gatccaacagtgaaatacgaccggcaaccggagtacctcgatgtaacagggggaaccttg
catccctaccaactggaaggactaaactggctgcgcttctcttgggcccagggcacagat
acaatcttggctgatgaaatgggtctaggaaagactgtgcagacagctgtgttcctatat
tccttatacaaagagggccactcaaagggtcccttcttggtgagtgccccactgtccacg
atcatcaactgggaacgagaatttgagatgtgggccccagatatgtatgtagtgacctac
gttggggacaaagacagccgggccatcatccgtgagaatgagttcacttttgaggataac
gctatacgtggaggcaaaaaagcatccagaatgaagaaggaggctgctgtgaagttccac
gtgcttctcacctcctatgaactgatcacaattgatatggccatactaggctctattgac
tgggcctgtctcattgtggatgaagctcacagactgaagaacaatcagtctaagttcttc
cgtgtgctgaacggttattccctccagcacaagctgctgcttacaggaactcctttgnca
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaccggagagattccataacttggagggc
ttcctagaagagtttgcagatattgccaaggaagaccagatcaagaagctgcatgacatg
ctgggcccacacatgctgaggcgcctcaaagctgatgttttcaagaatatgccatctaag
acagaactcattgtcagagtggagctgagccccatgcagaagaaatattataaatacatt
ttgacaagaaactttgaggcactgaatgcacggggtggtggtaaccaagtctccttgctc
aatgttgttatggatctgaagaagtgctgtaaccacccctacctctttcctgtggctgct
atggaagctccaaaaatgccaaatggcatgtatgatggtagtgctcttattcgagcctct
ggaaagctgttgctgctccagaagatgttaaagaaccttaaggaaggaggtcatagagtg
cttatattctctcagatgactaaaatgctggaccttctagaagactttttggaacacgaa
gggtacaaatatgagcggattgatggaggaatcacagggaacatgcgacaggaggctatt
gatcgcttcaatgctcctggtgctcagcagttctgctttctgctttcaactcgagctggg
ggtcttggtattaacttggccacagcagatactgtgattatctatgattcagactggaac
ccccacaatgatatccaggccttcagtcgtgcacacagaattggacagaacaagaaagtg
atgatataccgctttgtgacaagggcctcagtggaggagcgtatcactcaggtggccaag
aagaaaatgatgttaactcatctggtagtgagaccagggttgggctccaagacaggctcc
atgtccaaacaagaacttgatgacattctcaaatttggcactgaagagctcttcaaggat
gaggctactgaggggggggataacaaagaaggtgaggacagcagtgtcatccactatgat
gacaaagcaattgagcgcctgttggatcggaaccaggatgaaacagaagatacagaactt
cagggtatgaatgagtatctcagctccttcaaggtggcccagtatgtcgttcgcgaagag
gagatgggggaggaagaggaggttgaacgagagatcattaaacaggaggagtcagtggac
cctgattactgggagaaactgctgcgtcaccattatgaacagcaacaggaggatctggcc
aggaatctgggcaagggcaaacgtattcgcaagcaagttaactacaatgatggctcgcag
gaggatagagactggcaggatgaccagtcagataatcagtcagactattcagttgcttct
gaagaaggagacgaggactttgatgagaggtctgaagcagctcgtcggcctagccggaaa
ggcctgagaaatgataaggataagcctctgcctcccttacttgcccgtgtgggagggaac
attgaggtcttgggtttcaatgcccgccagcggaaagccttcctcaatgctatcatgcgc
tatggaatgccaccccaggatgccttcaccactcagtggcttgttcgggacctccgtggc
aagtcggagaaagagttcaaggcctatgtctcgctgttcatgcgccatttatgtgaacct
ggagctgatggtgcagagacctttgcagatggggtcccgcgggaaggtctttctcgacag
catgtccttactcgcattggggtcatgtcacttatacgcaaaaaggtgcaggaatttgag
catgtgaatggccgttggagtatgccagaactggcagagatagaggagaacaagaaactt
tcacagccaagctcaccctctcccaaaactccaactccttcgacaccaggggatacacag
ccaaatacacctgcccctgtccctccacctgaagaaggagtaaaagtagaagaaggagcc
agtgctaaggagcaaggagagtcatctgaaccagagaaggagctcagtgcctctgctact
gaaacagaggtccctatggagtgtgcccagcctgtggagacaccgccacaggaagcaaaa
tccccggtgaaccccacagaagcagatgaaaaaaaagtagaggaacaggaggtgaaggaa
agaccagatgagccaatggaagtagaaagcaaagctgatgtggagaaagtggaagacaga
acacctattgagaatcccccggaacctcctgtaatcactctggatgagaaagatgagaaa
aaggatgatgataagagagatgtggtgatgctgcagaatggagagatgctgaaagagtca
gtagatgaaaggcacaagaaggcagtaaagcagcgcttcatgttcaacatagcagatggt
ggcttcactgaactacactccctgtggcagaatgaagagcgggctgcaactgtcacgaag
aagacctatgagatctggcatcggcgtcatgattactggctccttgctgggattatcaat
catggctatgcccgttggcaggatattcagaatgatccacgttacgccatcctcaatgaa
cccttcaagggtgagatgaacaggggtaacttcctggaaataaagaataagttcttggcg
aggagatttaagctcctggagcaagcgctggtgatcgaggagcagttgcggcgagctgcc
tatctgaacatgtcagaagacccaactcatccatctatggctctgaacacacgttttgca
gaggtggaatgcctggctgagagccaccagcacctatccaaggagtcaatggccgggaat
aaaccagccaacgccgtgctgcacaaagttctgaagcagctggaggaacttttgagtgac
atgaaggcagatgtgactcgtttgcctgccaccattgcccgtatcccacctgtggcagtg
cgcctccagatgtccgagcgcaacatcctcagccggctggccaaccgcagcagtgagccc
cctccaccgccacctccccaacaagtggcccagcagcagtga
DBGET
integrated database retrieval system
