Pygoscelis adeliae (Adelie penguin): 103925089
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Entry
103925089 CDS
T06012
Symbol
COL11A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XI) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103925089 (COL11A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
padl00536
]
103925089 (COL11A1)
Glycosaminoglycan binding proteins [BR:
padl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103925089 (COL11A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_1
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
103925089
NCBI-ProteinID:
XP_009332010
LinkDB
All DBs
Position
Unknown
AA seq
1799 aa
AA seq
DB search
MQRWSTRWKTRRWPWDSAVTVLITFAILLRAAEVRSAEPVDVLKALEFHNSPEGVSRTAG
FCTNRRDSKGSDVAYRVSKTAQLSAPTKQLYPGGDFPEDFSILMTVKPKKGIQSFLLSVY
NEQGIQQVGVEVGRSPVFLFEDQNGKPAPEDYPLFRTVNIADGKWHRVAISVEKKSVTMI
VDCNKKTTKPLERSDKTVVDTNGITVFGTRILDEEVFEGEIQQLLIIADPRAAYDYCEHY
SPDCDSPVPNAAQAQDPQVDEYTPEDFIEYDYEYGDADYKETDSVTEGPPLFEETVAQTE
ANVVDGFQEYSIAENDYGPQTEAPSRTTEANEQNPAEEVFAEEYITGEDYDKKTEETEYG
NKGVDLSESDLLVDGDLGEYDFYEYKEYEEKPTDSTNEEFGPGVPAETDITETSVTGHGA
YGEKGQKGEPAVIEPGMLIEGPPGPRGPAGLTGPPGLQGPVGPPGDPGERGPPGRPGLPG
ADGLAGPPGTMLMLPFRFGGDGEKGPTISAQEAQAQAILQQARIAMRGPPGPMGLTGRPG
PVGGPGAAGAKGESGEPGPQGPRGVQGTPGPSGKAGKRGRPGADGARGMPGEPGAKGDRG
FDGLPGLPGDKGNRGDRGPQGPPGLPGEDGSRGEDGEVGPRGLPGEAGPRGLLGPRGTPG
PPGQPGIAGIDGPSGPKGNMGPQGEPGPPGQQGIPGPQGLPGPQGPIGPPGEKGPQGKPG
LPGLAGSDGPPGHPGKEGQSGDKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKG
EDGFPGFKGDMGLKGDRGEVGQPGPRGEDGPEGPKGRAGPSGDPGAAGPAGEKGKLGVPG
LPGYPGRQGPKGSTGFPGFPGANGEKGARGLHGKPGPRGQRGPTGPRGSRGPRGPTGKPG
PKGTAGNDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTG
PPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKVXCGSGEQIRRGL
RGFPGERGLPGAQGPAGLKGGEGPQGPPGPVGSPGERGAAGTAGPIGLPGRPGPQGPPGP
AGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPSGSPGEDGDKGEIGEPGQKGSKGDKGE
NGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGPRGFPGPPGPIGLQGLPGP
PGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSVGGVGEKGEPGEAGNPGP
PGESGTSGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGP
AGQDGVGGEKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGATGAEGRQGEKGAKGEPGA
EGAPGKTGPVGPQGPAGKPXGLRVIPGAVGEQGLPGAPGQDGPPGPLGPPGLPGLKGDPG
SKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGAKGDAGISGPAGPLGPPGPPGLPG
PQGPKGSKGSSGPAGQKGDSGLPGPPGPPGPPGEVIQPLPIQSPKKTRRSPDYMLSDAGD
NILDYSDGMEEIFGSLNSLKQDIEHMKYPMGTQNNPARTCKDLQLCHPDFPDGEYWIDPN
QGCSGDSFKVYCNFTAGGETCIYPDKKSEGVRISSWPKENPGSWFSEFKRGKLLSYLDVE
GNSINMVQMTFLKLLSASARQNFTYNCHQSVAWHDASSDSYDKALRFLGSNDEEMSYDNN
PYIKALHDGCASRKGYAKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVGPVCFLG
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatggtccacaaggtggaaaacgagaaggtggccctgggactcggctgtaacc
gtgctcatcaccttcgcaatcctgctccgggctgcagaggtcaggtcagctgaacccgtt
gatgtgctaaaagcattagaatttcacaattcaccagaaggagtatcaagaacagcagga
ttttgcacgaacagaagggattcaaaaggatcggatgtcgcctacagagtttcaaaaact
gcacagctgagtgccccaacaaagcagctgtacccaggtggagattttccagaagatttt
tcaatactaatgacagtaaaacctaaaaagggtatccagtccttccttctgtctgtctac
aatgagcaaggaattcagcaagtaggtgttgaagttggtagatcccctgtcttcctgttt
gaagaccaaaatggaaaacctgccccagaagactatcctcttttcagaacagtcaacatt
gctgatggcaagtggcatcgagtagctattagcgtggagaaaaaaagtgttacgatgatt
gttgactgtaacaaaaaaactacaaaaccacttgaaagaagtgacaaaacagttgtggac
accaatggcatcactgtctttggaaccaggattctggatgaagaagtttttgagggtgag
atccagcagctgttgattatagccgaccccagagctgcgtatgactattgtgagcattat
agcccagactgtgattccccagtgcccaatgctgctcaggctcaagatcctcaagttgat
gagtacacaccagaagattttatcgaatatgactatgagtatggggatgcagattataaa
gaaactgattctgtaacagagggacccccactgttcgaagagacagtagcacaaacagag
gcaaacgttgttgatggatttcaagagtatagcatagctgaaaatgactatgggccccag
acagaagctccctccagaaccactgaagcaaatgagcaaaatcccgctgaagaagtattt
gctgaagaatacataactggagaggattatgataaaaaaactgaggaaactgaatatgga
aacaaaggagtagacctcagtgaatctgatctgctggtagatggagatttaggcgaatat
gatttttatgaatataaagaatatgaagagaaaccaactgattccactaatgaggagttt
ggtccaggtgttcccgcagagaccgatatcacagaaacgagcgtgactggacacggggct
tatggagaaaaaggccaaaagggagaaccagctgtgattgaacctgggatgctcattgaa
ggaccaccgggaccaagaggacctgctggtcttacaggtcccccaggtctacaaggtcct
gttggtcctccaggtgaccctggtgaaaggggtccacctggtcgccctggtctccccggt
gctgatggtttagcaggtcccccaggtaccatgttaatgttgccgttccgttttggtgga
gatggtgagaagggcccaacaatctcagctcaggaagctcaagcacaagctattcttcag
caagctaggattgctatgagaggtccacctggtcccatgggactcactggaagaccaggt
cccgtgggtggacctggagcagcaggtgctaagggtgaaagtggtgaaccaggtccccag
ggtcctcgaggtgttcaaggtacccctggtccaagtggaaaagctggcaaaaggggacgt
cctggagctgatggtgcaaggggaatgccaggagaacctggtgcaaagggtgacagagga
tttgatggtcttcctggcctccctggtgacaaaggtaacaggggagaccgtggcccacag
ggaccacctggcttacctggtgaagatggatcaagaggagaagatggggaagttggacca
agaggtctcccaggtgaagctggtccgcgaggattactcggccccagaggtacacctggt
ccccctggacaacctggcattgcaggtattgatggaccttcaggcccaaaaggaaacatg
ggtcctcaaggggaaccaggacctcctggtcagcaaggaatcccaggcccacaagggctt
cctggtccgcaaggtcctattggacctcctggtgaaaaaggacctcaaggcaaacccggc
cttcctggccttgctggttctgatgggcctcctggtcatcctggcaaagagggtcagtct
ggagacaaaggtgcattggggcctccaggtcctcagggtcccattggctatccaggtcct
cgtggtgtaaagggagctgatggtgtccgtggtctcaagggatccaaaggtgaaaagggt
gaagatggttttccaggttttaaaggtgacatgggccttaaaggtgaccggggagaagtt
ggtcagccaggtccacgaggagaagacggtccagaaggtccaaaaggtcgagcaggtcca
tctggggacccaggtgctgctggtccagctggggaaaagggtaagcttggtgtccccgga
ttgccaggatacccaggaagacaaggtccaaagggctcaaccggtttcccaggatttcca
ggtgccaatggagagaaaggtgcaaggggtttacatggcaaaccaggccccagaggacag
cgaggaccaacaggtccaagaggctcaagaggtcccagaggtcccactggcaaaccaggt
ccaaagggtactgcaggcaatgatggtcctcctggcccaccaggtgaaaggggaccacaa
gggcctcagggacctgttggattccccggaccgaagggacctccagggccacctggaaaa
gacggcctgcctgggcacccagggcagcggggtgagactggtttccaaggaaaaactggt
cctcctggtcctggtggtgttgttggccctcagggtcctactggggagactggcccaatt
ggtgaaagaggtcatccaggtcctcctggcccaccaggtgaacaaggcctcccaggtgct
gcaggaaaagaaggtgctaaggtatgatgtggctctggggaacaaattagaaggggtctt
cgtggtttccctggagagagaggccttccaggcgctcagggtccagctggtctgaaagga
ggggaaggcccacaaggcccacctggcccagttggttcaccaggggaacgtggagcagca
ggcactgctggcccaattggtctaccagggcgtcctggacctcagggtcctccaggcccc
gcaggcgagaagggtgctcccggtgaaaaaggtcctcaaggtccagctggacgtgatgga
gtgcagggtcctgtaggacttcctggtcctgctggtcctagtggttctcccggagaagat
ggtgacaagggtgaaattggtgaaccgggtcagaaaggtagtaaaggtgacaagggagaa
aacggtcccccgggtccaccaggtctccagggtcctgttggtgcccctggtatagctgga
ggtgatggggagccaggcccaagaggtcagcaagggatgtttgggcaaaaaggtgatgaa
ggtcctcgaggcttccctggccctccaggccctattggcttacagggtttgcctggccca
ccaggtgaaaagggtgaaaacggtgatgtgggtccaatgggtccacctggcccgccaggt
ccaagaggtccccagggtcctaatggagctgatggtcctcaaggtcccccaggctccatc
ggctctgttggaggtgttggtgaaaagggtgaacctggagaagctggtaaccctggacct
cctggagaatctggaacatctggtccaaaaggtgaaaggggagaaaaaggtgaggctggt
ccacctggagcagctggaccaccaggtgctaaaggacctccaggtgatgatgggcctaag
ggtaacccaggcccagttggttttcctggagatcctggtccccccggggaacccggtccg
gctggtcaagatggtgttggtggagagaagggtgaagatggtgatcctggtcaacctggt
ccaccaggtccttcaggtgaagctggcccacctggtccacctggaaagagaggacctcct
ggagcaacgggtgctgaaggcagacaaggtgaaaaaggtgcaaagggtgaacctggtgca
gaaggggctcctggaaaaacaggtccagttgggccacagggacctgcaggaaaaccannt
ggtctccgggtcattcctggagctgtgggagaacaaggtctacctggagcgccaggtcag
gatggccctcctgggcctctgggtccacctggcttgcctggcctgaaaggagacccaggt
tccaaaggagagaagggacatcctggtttgattggcctgattggacctccaggagagcaa
ggtgaaaagggcgataggggtcttcctggcccacagggatctcctggagccaagggtgat
gcaggaatttctggtcctgctggtccactcggaccccctggtcctcctggtttacctggt
ccccaaggtccaaaaggttccaaaggatccagcggtcctgctggtcaaaagggtgacagt
gggttacctggtccacctggtcctccaggtcctccgggtgaggtaatccagccgctgcca
atccagtcacccaaaaagacaagaagatctcctgattacatgttatctgatgctggtgat
aatattctggattattccgatggcatggaagagatctttggttcattgaattccctgaag
caagacattgagcatatgaagtatccaatgggcactcagaataacccagcccgaacttgc
aaagacttgcaactctgccacccagacttcccagatggggaatattggattgatcctaac
cagggctgctctggagactccttcaaagtatactgcaatttcacagcaggcggggaaact
tgcatctacccagataagaaatctgaaggagttagaatttcatcatggccaaaggagaat
ccaggatcttggtttagtgaatttaagcgaggcaaacttctttcctatttggatgttgaa
ggcaattccattaatatggtccaaatgacattccttaaactactgagtgcctctgccaga
caaaatttcacttacaactgtcatcagtccgtagcttggcatgatgcatcatctgacagc
tatgacaaagcgctaaggttcttaggatcgaatgatgaagaaatgtcttatgacaacaac
ccttacatcaaagctcttcacgacggctgtgcatcacgaaagggctatgcaaagacagtg
atcgaaatcaacacacccaaaatagaccaagtgcctatagttgatgtgatgatcaatgac
tttggcgatcagaaccagaagtttggatttgaggtcggtcctgtctgcttcctcggttaa
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integrated database retrieval system
