Paenibacillus sp. FSL R7-0273: R70723_01475
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Entry
R70723_01475 CDS
T03356
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paea
Paenibacillus sp. FSL R7-0273
Pathway
paea03420
Nucleotide excision repair
paea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R70723_01475
03430 Mismatch repair
R70723_01475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paea03400
]
R70723_01475
Enzymes [BR:
paea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R70723_01475
DNA repair and recombination proteins [BR:
paea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R70723_01475
MMR (mismatch excision repair)
Other MMR factors
R70723_01475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
YdjO
AAA_12
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AIQ44723
UniProt:
A0A089KCP3
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Position
complement(323099..325438)
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AA seq
779 aa
AA seq
DB search
MNKLLFHNIPLGASGERIPQAAIASARTSRETVKPGEGDAAYFRRLEEGGILLNPPQIAA
VRHHEGPLLTLAGAGSGKTSVLICRTGYLLSVRGISPARMLLLTFSSKAAAEMRERIAVL
PGVAEGDAARLQARTFHSFFLYFLRRQGLRQDIFHETRRQHILLKQIMRELGLPKDAYPP
ETLLALLSSCKMNMRDADTLPETNTAEQEMKAILKLYEQWKQDHNKMDFDDVLLIAYKML
LEQPQLLQELQQKFQYVMVDEFQDTNELQYELVKMIAYPQNNLMVVGDDDQTIYSFNGAR
SEFILEFEKLYPGARVVTLDINYRSGPAIIGLGNGIIRHNLRRRSKTLQAARSGGAQPRY
LRPQTADEEAEQIVDHIVSEVGGGSREYRDFALLYRASSSNRAVLELLLLRDIPYIDYGE
GQLLYEHWLILPVLDHLRLSLNRRNFAAMESIMPTLYMNRETGMEHIRRMEAVQPKQGPL
IHLLSLPGMEDFKGTKLRERLELIRGLAALTPLQAIRRIRTSFYDYFIEANERHQATLHR
ETLKEMLDELETSAERFDSLPVFLDFIASITERNELSRQSGLKEQGNRVALMTIHKSKGL
EFPVVFLLGASEGILPHSSALEGDRLKDRKAGQLPPAGSFRAGSDSGIAALEEERRLAYV
AVTRAREELFISSPARHRGKKAEVSRFMLSAFRSAAAPSRPAATTTSSVSVSRIGVSRVH
TSGTNGKARTHTVPVWNCTGARCPGWTRMKAGGAEDHLASKPCPLCSSPMEKSTREVPV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcttttatttcataatatcccgctcggtgcaagcggtgaacgtattccccag
gcggcaattgcctcagcccggaccagccgtgagacggtgaagccgggggaaggtgatgcc
gcttatttccgccggcttgaggagggcggaatcctgctgaacccgccgcagattgcagcg
gtgcggcatcacgagggaccgctgctgacgctggccggtgcaggctcgggtaaaacctcg
gtgctgatctgcagaacaggctacctgctgtccgtgcggggaatttcccctgcgcggatg
ctgctgcttaccttctccagcaaggcggcggcggagatgcgcgagcgcatcgctgtgctg
cccggcgtcgccgaaggcgatgccgcgcgcctgcaagcccgtaccttccactctttcttt
ctttattttctgaggcgtcaggggctgcggcaggatatctttcatgagacacgccgccag
cacatcctgctgaagcagattatgcgggagctggggctgccaaaggatgcttatccgccg
gaaacgctgcttgccctgctgtcttcctgcaagatgaatatgagggatgcagatacgctc
cctgaaacaaacaccgccgagcaggaaatgaaggcgattctgaaactctacgagcagtgg
aagcaggatcataataagatggacttcgatgatgtgctgctgattgcctataaaatgctg
cttgagcagccccagctcctgcaggagctgcagcagaaattccagtatgtcatggtagat
gagttccaggatacgaatgagctgcagtatgagctggtcaaaatgattgcttatccgcag
aacaacctgatggtcgtcggcgatgatgaccagacgatctactcctttaacggagcgcgc
agtgaattcattctggaatttgaaaagctctatcccggggcaagagtcgttaccctggat
atcaattaccgttccggtccggccattatcggcctcggcaacggcatcatccgccacaac
ctgcgccgccgctccaaaacgctgcaggcggccagaagcggaggcgcacagccccggtat
ctgcgcccgcagacggcggatgaggaagccgagcagattgtcgaccatatcgtaagcgag
gttggcggcggcagccgggaataccgtgattttgccctgctgtaccgggcctccagcagc
aaccgggccgtactggagctgctgctgctgcgggatatcccctacatcgattacggtgaa
gggcagctgctctacgagcactggctgatcctgccggtgctggaccatttgcggctgtca
ctgaaccggcgcaactttgccgcgatggagagcattatgccgaccctgtatatgaaccgc
gaaaccggcatggagcatatccgccggatggaggctgtccagcccaagcagggaccgctg
attcatctgctttctctgcccggcatggaggatttcaagggcaccaagctgcgggagcgg
ctggagctgatccgcggcctggctgcattgacgccgctgcaggcgatccgccgtatccgg
acaagcttctatgactacttcatagaggctaatgagcggcatcaggctactctgcaccgt
gagacgctgaaggaaatgctcgacgagctggaaacctcggctgagcggttcgacagcctc
cctgtcttcctcgactttattgccagcattaccgaacgcaatgagctgagccgccagagc
ggactgaaggagcagggcaaccgtgttgccctgatgaccatccataaatccaaagggctg
gaattccccgttgttttcctgctcggggcctcggagggcattctgccccacagctcggcg
ctcgagggcgaccggctgaaggaccgcaaggccggtcagctcccgcccgccggcagcttc
agggcaggcagcgattccggcatcgctgcactggaggaagagcggcggctcgcttacgtc
gccgtcacccgggcccgggaggagctgttcatcagctccccggccagacaccggggcaag
aaggcggaggtctcccgcttcatgctctccgccttccgctctgctgctgccccgtccaga
cctgccgctaccacgacttccagcgtgtccgtgagcagaatcggcgtgtccagggtgcac
acctccggcacaaacggaaaggcacggacccacaccgttccagtatggaactgtaccggc
gcccgctgcccaggctggacccggatgaaggccggcggggcggaggaccatctggcctcc
aagccctgcccgctgtgcagctccccgatggagaaaagcacccgcgaggttcctgtgtaa
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