Paenibacillus sp. FSL R7-0331: R70331_04855
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Entry
R70331_04855 CDS
T03357
Name
(GenBank) DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
paee
Paenibacillus sp. FSL R7-0331
Pathway
paee03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
paee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
R70331_04855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paee03400
]
R70331_04855
Enzymes [BR:
paee01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
R70331_04855
DNA repair and recombination proteins [BR:
paee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
R70331_04855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
AIQ50922
UniProt:
A0A089KRA0
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All DBs
Position
complement(1101051..1101998)
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AA seq
315 aa
AA seq
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MEVKPVKPFEPVLAAQLPSGSQWIAQIKWDGVRMLSCYDGSSIELVNRRGNRRTLQYPEL
TVQGRYCRADSYILDGEVIALSGGKPSFHEVMRRDGLRSEAAVRAVKPQVPVLYMVFDIL
YCNGEWLLDRPLSVRQQLLQDVLLPHPHVQNVPSYTDPAQLFAAACKGGLEGIICKDIRS
TYAPGGKDARWQKRKNILDVTAVAGGVTFRDGMVNALLLGLYDDEGRLHYIGHAGAGRLT
ATDWRNLTAQAHNLEVPVMPFTGVPQRSKDAVWIRPSLVFKLHFLEWNASGTLRQPVIQA
QVDLPPDACRLEQRG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaaagccggtgaagccgtttgagccggtgcttgccgcacagctgccttccggc
agccagtggatcgcccagataaaatgggacggtgtccgcatgctctcctgctatgacggc
agctctatagagcttgttaaccgccgtggcaaccggcgcaccctgcagtatcccgaattg
accgtacagggacgttactgccgcgcagacagctatattcttgacggtgaggttattgcc
ctaagcggggggaagccgtcctttcacgaggtgatgcggcgtgacggcttaagaagcgaa
gcagctgtccgggcagtcaagccgcaggttccggtgctgtatatggtatttgatattctg
tactgtaacggtgaatggctgctggaccggccgttgtccgtacgccagcagctgctgcag
gatgtactgcttcctcacccccatgtgcagaatgtgccgagctacacagatccggcgcag
ctgttcgccgctgcctgcaaaggcggtctggaaggcatcatctgcaaggatatacgcagc
acttatgcccccggcggcaaggatgcacgctggcagaaacgcaagaacattctcgacgtg
accgctgttgccggaggggttaccttccgggatggaatggttaatgccctgctgctcggt
ctttatgacgatgaaggcaggctgcactatatcgggcatgcgggtgcaggccggctgaca
gccacggactggcgtaatctgacagcacaggcccataatctggaggtgcccgtcatgcct
tttacaggtgttccgcagcgcagcaaggatgcggtatggatcaggcccagcctggtattc
aagctgcatttcctggaatggaacgcctccggcacgctgcgccagccggttattcaggca
caggttgatctgccgcctgatgcctgccggctggaacagcgcggttga
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