Paenibacillus sp. FSL H7-0357: H70357_28860
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Entry
H70357_28860 CDS
T03358
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
paeh
Paenibacillus sp. FSL H7-0357
Pathway
paeh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paeh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H70357_28860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paeh03019
]
H70357_28860
03009 Ribosome biogenesis [BR:
paeh03009
]
H70357_28860
Enzymes [BR:
paeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H70357_28860
Messenger RNA biogenesis [BR:
paeh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H70357_28860
Ribosome biogenesis [BR:
paeh03009
]
Prokaryotic type
rRNA helicases
H70357_28860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
DUF6127
Motif
Other DBs
NCBI-ProteinID:
AIQ20266
UniProt:
A0A089I7M5
LinkDB
All DBs
Position
complement(6278767..6280254)
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AA seq
495 aa
AA seq
DB search
MNKASFAAIGIQDDLVARLSEFGITDPSPVQEQTIPLLLEGRDVLAASQTGTGKTLAYLL
PLIQGINPEHRVVQKVVLAPTQELAMQILREAERYGAHRGIKAMGLIGGAAIKRQIDKLR
EHPQLVVGTPGRVRELIGLRKLKMHEVSTIIIDEADQMFQLSGAGEVAKIVSSALRTRQL
VMLSATIGPETQALAAREMKNPAEVGIDPGVMTAQSLEHHYVVAEERNKIDMLRRVIRHY
NPQRAIVFVNATEDIAEVEAKLNHLGLTAAAIYGDADKVTRSNVLTRFRDGKFRVLVASD
VAARGLDIENLTLVVSFDPAFDSEHYVHRAGRTGRMGRRGLSVSIVTEQQTFIMRKFARE
LNITLEEKEMVAGKVMAADEARSPLGGGERGRGESATPRKEGAAPRSGKPPVRTSAVQAD
AAIKPALPRQGQAGTAAGGEVRREGHHGTGPAAGGRGGAAPAGKPRGSSAEREKNRKNKG
APKWLKNKTPRGDGQ
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcttcttttgcggccatcggcatccaggacgaccttgttgccaggctgtcg
gaattcggcattactgatccatctccggtacaggagcagacgatcccgcttctgctggag
gggagagatgtgctggccgcttcccagacaggtaccggcaaaaccttggcgtacctgctg
ccgctgattcaagggattaacccggagcaccgggtagtccaaaaggtggtgctggcacca
acccaggagctggcgatgcaaatcctccgtgaggccgagcgctatggggcccaccggggg
atcaaggcgatgggcctgatcggcggagcggcgatcaaacgccagattgacaagctgcgc
gagcatccccagctcgtagtgggcacccctggacgcgtgcgggagctgatcggcctccgc
aagctgaaaatgcatgaggtcagcacgatcatcatcgatgaggcggaccagatgttccag
ctcagcggagccggtgaagtggcgaagatcgtcagcagcgcgctgcgcacgcgccaattg
gtcatgctgtcagcgaccatcggaccggagacccaggcgctggccgcacgggagatgaag
aacccggctgaggtcggcattgatcctggagtgatgacggcacagagtcttgagcatcac
tatgtggtggcagaggaacggaacaagattgatatgctgcgccgggtcatccgccattac
aacccgcagcgggcgatagtgttcgtgaatgctaccgaggacattgccgaggtggaagca
aagctgaaccatcttgggcttacggcagcggcgatctatggggatgcagacaaggtgaca
cgcagcaacgtacttacccggttccgtgacggcaagttccgcgtcctggtggcgagcgat
gtggcagcccggggcctggatattgagaatctgacgctggtagtgagctttgatccggcg
tttgactcggagcattatgtgcaccgggcagggcgtacgggacgtatgggacgccgcgga
ctgtcggtctccattgtaacggagcagcagacgttcattatgcgcaaattcgcccgagag
ctgaatatcacgcttgaggagaaggaaatggtcgccggcaaggttatggcggctgatgaa
gcccgcagcccgctgggcggcggcgaacgcgggcgcggggaaagtgccaccccgcgcaag
gaaggcgccgcaccgcgcagcggcaagccgcctgtaaggacatcggctgtgcaggccgat
gcggccatcaaaccggccttgccgcggcaaggccaggcgggaactgccgcaggcggagaa
gtgcggcgcgaagggcaccacggtacgggcccggctgcaggcgggcgcggcggtgcagct
cctgcgggtaaaccgcgcggcagcagtgcggaacgtgagaagaaccgcaagaacaaggga
gccccaaaatggctcaagaacaaaaccccgagaggtgacggtcaatga
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