Paenibacillus sp. FSL H7-0737: H70737_05065
Help
Entry
H70737_05065 CDS
T03359
Name
(GenBank) DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
paej
Paenibacillus sp. FSL H7-0737
Pathway
paej03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
paej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H70737_05065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paej03400
]
H70737_05065
Enzymes [BR:
paej01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
H70737_05065
DNA repair and recombination proteins [BR:
paej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H70737_05065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
mRNA_cap_enzyme
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
AIQ22274
UniProt:
A0A089JMM3
LinkDB
All DBs
Position
complement(1146744..1147691)
Genome browser
AA seq
315 aa
AA seq
DB search
MKLQPIIPFEPILAGQLPAGNQWIAQIKWDGVRMLSYYDGSTTQLINRRGNYRTAQYPEL
TDVNTYCKADSVILDGEIIALKDGKPSFHEVMRRDSLKNGSTISVVRYQVPVIYMIFDIL
FYNGQSTMDQPLFSRQQLLNDILLPHPHVQAVPSYTDPTELFAAAQSQSLEGIVCKDINS
TYAPGGKDKRWQKRKIISDITAVAGGVTFRDGIVNALLLGLYDDKGNLHYIGHAGPGKLT
VQDKRDLTAEVQHLKIDQMPFTTDPQRGKGAFWIKPKLVFKVHFLEWNTSGTLRQPVTQA
RVDLPPESCTMEQKG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcagcctattattccttttgaacccatactggctggacagcttccagcaggc
aaccagtggatcgcacagattaaatgggatggcgttcgcatgttgtcctattacgacgga
agcactactcagcttattaacagacgtggaaattaccgtacagcgcaataccctgagctt
actgatgtaaatacttattgcaaggctgattccgttattcttgatggtgaaatcattgca
ctcaaggacggcaagccctcatttcacgaagttatgcggagggatagcttaaagaatggc
tccaccatttccgtcgttaggtatcaggttcctgtcatttatatgatttttgatattctg
ttttataatggccaatcgacgatggatcagcctttattctcacggcagcagctgctaaac
gatattctgctgccgcatccccacgtacaggccgtacccagttataccgatcccacagaa
ttattcgccgccgctcagagtcagagcttagagggaatcgtctgtaaggatatcaacagt
acttatgctcccggtggaaaagataaacgctggcagaaacgcaaaatcatttcggatatt
acggcagtagccggaggtgtaaccttccgtgacggcatcgtcaatgcgcttcttcttggg
ctgtatgatgataaagggaatttgcattatatcggacatgccgggccaggaaaattgact
gtacaggataaacgcgacttaactgcagaggtacagcatttaaaaatagatcaaatgccc
tttacaactgatccccagcgagggaagggtgctttttggataaaaccgaagcttgtcttc
aaagttcattttttggaatggaatacctcaggcactctgcgccagcctgttactcaagct
agggtagatcttcccccggaatcatgcactatggagcaaaaaggataa
DBGET
integrated database retrieval system