Paenibacillus sp. FSL H7-0737: H70737_14070
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Entry
H70737_14070 CDS
T03359
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
paej
Paenibacillus sp. FSL H7-0737
Pathway
paej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H70737_14070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paej03019
]
H70737_14070
Messenger RNA biogenesis [BR:
paej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H70737_14070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
ODP
Motif
Other DBs
NCBI-ProteinID:
AIQ23893
UniProt:
A0A089IN52
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All DBs
Position
complement(3151754..3153421)
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AA seq
555 aa
AA seq
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MKVAAKQLWIAALGGVNEIGKNMYFLQYADDIIVIDCGSKFPDESLLGIDLIIPDVTYLL
SNLDKIRALVVTHGHEDHIGGIPYLLKQLNLPIYASRLTLGLIENKLREHGILRQTKLHV
IDSESTLQLGAITTTFFNTNHSIPDCLGVVFDTPEGTVVHTGDFKFDMTPVNKQYPDIHK
MADIGKNGVKFLLSESTNAERPGFTPSEKLVGAHIEEAFMKADRRIFISTFASNVHRLQQ
IIEAARLTDRRLTLLGRSMVNVVRVAQELGYLSIPDNMLIEPTEAAKLPPEQVTVLCTGS
QGEPMAALSRLANASHRQMEIQAGDTVLIAANPIPGNERNVSRIVDNLYVLGAKVIYGSR
SELHVSGHASQEELKLMLTLMKPEYFIPIHGEYRMLHHHSLLAEAVGVNPNNIFILKNGD
IVESSSGVVRQSGRVAAGQTLVDGLGIGDIGNVVLRDRRQLSADGILITVITLSQEDGRL
LNEPDTISRGFIYVRNSETLMEEINKLVTSTLQKMSEADLGEWNIIKQTIKETLSRFLYE
KTKRRPMILPIIIEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtggcagcaaagcagctctggattgcagcattaggcggtgtgaatgaaattggt
aagaatatgtatttcctgcaatatgcagatgatattattgtcattgattgcggttctaaa
tttccagacgaaagtctactggggattgacctcattattcctgatgttacgtatttatta
agtaatcttgataagattcgagcattagtagttacacatggacatgaggatcatattgga
ggaattccgtatctactcaaacaattaaatcttccgatctacgcatctcggttaacctta
ggtctaattgaaaataaactgagggaacacggaatattacgtcagaccaagcttcatgtc
attgattctgagtctactttacagctaggagcgattactacaacgttctttaataccaat
catagtattccggattgccttggtgttgtattcgacaccccagaagggaccgttgttcat
acaggggatttcaaatttgacatgacccctgttaataagcagtatccagacatacataaa
atggctgacatcggtaaaaatggtgtaaagttcctgctctcagagagtaccaatgcagaa
cgcccaggcttcaccccctctgaaaaactcgttggcgctcatatagaagaagcattcatg
aaagctgaccgtagaatctttatctctacctttgcttcaaatgtacaccgtctacaacag
atcattgaagctgctcgtttaaccgatcgtagattaaccttacttggcagaagtatggtt
aatgttgtccgagtagcccaggaactcgggtacttgagcattccagataacatgctgatc
gagcctacagaagctgccaaactccctccagagcaagtaactgtattatgtacaggcagt
caaggagagcccatggctgcgttatcgcgactggctaacgcaagtcataggcagatggaa
atccaggcaggagataccgttctgatagcagctaatcccattcccgggaatgaacgcaat
gtatctagaatcgtcgataatttatacgtgctgggcgctaaagtcatctatggatcacgc
agcgagcttcatgtatctgggcatgcaagccaagaagagcttaagttaatgttaaccttg
atgaaacctgaatatttcataccgattcatggtgaataccgtatgctacatcatcacagc
ttgttagcagaggcagttggtgttaaccccaataatatctttattctaaaaaatggagat
atcgtcgagtcatcatcaggtgtcgtccgccaatctggccgagtggcagctggacaaacc
ctagtggatggccttgggattggagatattggtaatgtcgttcttcgcgatcgtcgccag
ctgtcagcagacggtattttgattacagtgattacattaagccaagaagatggacgttta
ttaaacgagccggataccatatccagaggattcatctatgtccgtaactcagaaacttta
atggaggagatcaacaagcttgtaacctccacccttcaaaagatgagtgaggctgaccta
ggcgagtggaatatcatcaagcagaccatcaaggagaccctaagtagattcctgtacgaa
aaaacgaaacgacgtccaatgattctccccatcattattgaggtgtag
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