Pseudomonas aeruginosa LES431: T223_05895
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Entry
T223_05895 CDS
T02970
Name
(GenBank) exodeoxyribonuclease
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pael
Pseudomonas aeruginosa LES431
Pathway
pael03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pael00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
T223_05895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pael03400
]
T223_05895
Enzymes [BR:
pael01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
T223_05895
DNA repair and recombination proteins [BR:
pael03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
T223_05895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
ABC_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AHC63838
LinkDB
All DBs
Position
complement(1251927..1253306)
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AA seq
459 aa
AA seq
DB search
MRNDPFQRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNLARPASGHVYFTLKDS
NAQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGALRLAF
EALKEKLAGEGLFASERKRLLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELTLVPT
AVQGREAVAQIVRALQLADRQGFDALILARGGGSLEDLWCFNEEAVARAVAACATPIVSA
VGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLRMRDQLLRERLR
LEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERQLAVRHERLVRLETRLAAQHPGRTL
ALLRQKLDSLAARLPRAAREVLKDRRQRLEGLAQTLNVVSPLATLGRGYSILLDERGRAI
RDAGQTQPGQRLKARLAEGELEVRVEDNHRTPVTLSLLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaacgatcccttccaacggctcggcctcgatcgcgaggtgctgaccgtcagccaa
ctgaaccagcgcgcccgcctgctgctggaagacgtgttcccgcaggtctgggtcgagggc
gagctgtccaacctcgcccggccggcctccggccatgtctacttcaccctcaaggacagc
aacgcgcagatccgctgcgcgctgttccggcagaacgccctgcgcgtacgccaggccttg
cgcgacgggctggcggtaaaggtgcgcgggaagatctcgctgttcgagggacgcggcgac
taccagttgatcgccgataccgtcgagccggccggcgacggcgccctgcgcctggccttc
gaggcattgaaggaaaaactcgccggcgaaggcctgttcgccagcgaacgcaagcgtcta
ctgcccgcccatccgcgccgcatcggtatcgtcagttcgcccagcggggcggtgatccgc
gacatcatcagcgtgtttcgccgccgcgcaccgcaggtcgagctgaccctggtgcccacc
gcagtgcagggccgcgaggccgtcgcgcagatcgtccgcgcgctgcaactggccgaccgg
cagggcttcgacgcgctgatcctggcccgtggcggcggttccctggaagacctctggtgc
ttcaacgaagaagcggtggcgcgcgccgtggcggcctgcgccacgccgatcgtcagcgcg
gtcggccacgagaccgacgtatcgatcagcgacttcgtcgccgacgtgcgcgcgccgacg
ccttcggccgccgccgaactgctggcgcccaacgccggcgacctgcagcagcgtctcgac
ggcctgcgccggcgcctggtgctgcgcatgcgcgaccagttgctgcgcgaacgcctgcgc
ctggaaggcgtcgcccgccgcctgcgccatcccggcgaacgcctgcgccagcaggcacag
cgcctggacgacctggacatgcgcctgcgccgtgccttcgagcgccagctggcggtccgc
cacgaacgcctggtccgcctggagacgcgtctcgccgcacagcatccgggccgcaccctg
gcgctgctccggcagaagctcgacagcctcgccgcgcgcctgccgcgcgccgcccgcgag
gtactgaaggatcgtcgtcagcgcctcgaaggactggcgcagacgctcaacgtggtcagc
ccgctggcgaccctgggccgcggctacagcatcctcctcgacgagcgtggccgggcgatc
cgcgatgccggccagacccagccgggacagcgcctgaaggcgcgcctcgcggaaggcgaa
ctggaggtgcgggtcgaggacaaccaccggacgccggtgaccctgtcgctgctggactga
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