Pasteurella aerogenes: NCTC13378_00713
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Entry
NCTC13378_00713 CDS
T05989
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
paet
Pasteurella aerogenes
Pathway
paet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC13378_00713 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paet03400
]
NCTC13378_00713 (recB)
Enzymes [BR:
paet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC13378_00713 (recB)
DNA repair and recombination proteins [BR:
paet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC13378_00713 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
AAA_30
ResIII
SLFN-g3_helicase
AAA_12
Motif
Other DBs
NCBI-ProteinID:
VEG70246
LinkDB
All DBs
Position
1:769396..773010
Genome browser
AA seq
1204 aa
AA seq
DB search
MTTQSLNPTAMPLNSVSLIEASAGTGKTHTMVSLYLRLLLQAGENPFPQALNVEQILVVT
FTEMATQELKERIRERIYQSKQLLIQYRQTQDKTVLAKDPFLFELADSITDLTQAISRLT
LAEQNMDLAKISTIHSFCLQTLMQYAFNSGIHFNIELLNDEQELLQRIVNEFWRTHFYHQ
SVAATRYIFAQCRTPAQLLDKIASQLSGAALKPRIDAPHLLDGDISSFLSAISPLLSTLN
EFKQTWLSVAPDLHAQMKEKKTVRVDWLDSRFAELHFWASDPNVVSVPEKLHYFTTEAIN
KSKNPVEHPIFAKVDQLIAEIGTQIDTLEAVFLYHCINAIRQRWFEYKLNHRQKGFNDLL
RLVHDALRGEQGERLAELIRQQFPFAMIDEFQDTDALQYQIFATVYLSPQAKDSGFIMIG
DPKQSIYKFRGADIFTYLKAAKQAKQRYTLTENWRSGQPLIDCVNRFFDFQQPPPFLYQD
IQFLPVQAGSEKADFVLDGKIEPPMRCYVGEAKNFADCCANSIQHWLKSALENQANIADA
PLQAKNIAVLVRNASQAEMIKQALLTRGIASVYLSDKSNVFDSPVAMDMLQILYACFNPL
NERTLLRAISCSLFALSSEQLYQIRQNENQWEMWVETFLAYQKLWQQQGVLVMLHYLLQE
QQISEKLLALPQGERKLTDFLHLAELLQQATRLNDTEAALLHWFEKQIQGKARLTENIRL
ESERELVKIVTIHKSKGLAYDVVWLPFIANALINHSDPIESYYDSDADEMFWDMNGTHAG
ERLQEKMAEELRLLYVALTRAKYQVVMALPEQFKDNWSALLYCLTQGQIGDQPKIKAKFD
KSAVNLIEDLKSLSTNLAIEVQPMTALEVLPPLSDTVPEELLSSASFHGHIQRDWQVSSF
SKLLEQHQRLLAEQNAERSGERAVEMSPIFDVAKDYDQQFAISDEILKETAAELICEEAE
IVSYPLGFSPFDFPHGPHIGSALHRYFEKNEFAQFTDADKLHDFCHGLMLSEDWVAPLQQ
WFNAILHTPLITNENLSLEQISRKNALRELQFYLQVNQKFSAEKFNLLLEKYHHLKSNPL
ISYEFNGMLRGFIDLVFRHQGKYYIMDYKSNFLGSLAADYAPSALAQTMLNSHYDWQYLL
YCVALHRYLKSRDPDYQYERHFGGVIYAFLRGMNGQTVPPGQNGQGIFFDKPDVRLIEGL
EELF
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacaatctttaaatccaactgccatgccgcttaattcggtcagtcttattgaa
gcctccgccggtaccgggaaaacccataccatggtttctctatatttgcgtttgttatta
caagcaggagaaaatccctttccgcaggcgctgaatgtggagcaaattttggtggtcacc
tttaccgaaatggcaacccaagagctgaaagaacgtattcgagaacgcatttatcagagc
aaacaactactcattcaatatcgccaaacgcaagataaaaccgtattagcaaaggatccc
tttttatttgagttggcagatagtatcacggatctcacgcaagccatttcgcgtttaacc
cttgccgaacaaaatatggatttggcgaaaatttcgactattcacagtttttgtttgcaa
acccttatgcaatacgcctttaattccggtattcattttaatattgagctactaaacgac
gaacaggaattattacaacgtatcgttaatgaattttggcgcacgcatttttatcatcaa
tccgttgctgcaactcgttatattttcgcccaatgtcgtacgccggcgcaattattggat
aaaattgcctcgcaactttccggcgccgcgttaaaaccgcgtattgatgcaccgcactta
ttagacggtgatatatcttcttttttaagcgcaattagcccgttgttgtcaacattaaac
gaatttaaacaaacttggttaagtgtcgctcctgatttacatgcgcagatgaaagaaaag
aaaactgttcgtgtggattggttagattcccgttttgccgagttacacttttgggcaagc
gatccgaatgtggtttcagtaccggaaaaactccattatttcaccacggaggcaatcaac
aaaagtaaaaatcccgtggaacatccaatatttgccaaagtagatcagctgattgctgaa
attggcacgcaaattgatactttagaagccgtttttttatatcattgcattaacgccatt
cggcaacgttggtttgaatataaattaaatcatcgccaaaaaggttttaacgatttatta
cggttggtgcatgatgccttgcgtggcgagcaaggagagcgtttagcggaattaattcgg
cagcaatttccttttgccatgattgacgaatttcaggatacggacgcgctacaatatcaa
atttttgccacggtttatctctcaccgcaagcgaaagatagcggatttattatgatcggc
gatccgaaacaatccatttataaatttcgcggtgccgatatttttacttatcttaaagcg
gcaaaacaggcgaaacaacgttacacgttaacggaaaattggcgttctggtcagccgctg
attgattgtgttaatcgtttttttgattttcagcaaccgccaccatttttatatcaagat
attcaatttttaccggtgcaggcggggagtgagaaagccgattttgtgttggatggaaaa
attgaaccgcccatgcgttgttatgtgggagaggcgaaaaattttgccgactgttgtgct
aattccattcagcattggctaaaaagtgcgctggaaaatcaagccaacatcgcagatgca
ccgttacaagccaaaaatatcgcagttttggtgcgcaatgcgtcacaagcggaaatgatt
aagcaagccttattaacgcggggtattgcttcagtgtatttatccgataaaagcaatgtg
tttgacagccctgtggcaatggatatgctacaaattttgtatgcctgttttaatccgtta
aacgaaagaaccttgctacgcgctatttcttgtagtctttttgccttaagcagcgagcag
ctgtaccaaattcgacaaaatgaaaaccaatgggaaatgtgggttgaaacttttcttgct
taccaaaaattatggcagcaacaaggtgtgttggttatgttacattatttgttgcaagaa
caacaaattagcgaaaaattattggcactgccgcaaggggaacgtaaattaacggatttt
ttgcatttggcggaattattgcaacaagccacccgtttaaatgatacggaagcggcgtta
ttacattggttcgaaaagcaaattcaaggcaaagcacgtttaacggaaaatatccgtttg
gaaagcgaacgggaattggtcaaaatcgtgaccatccataaatctaaaggcttggcttat
gatgtggtgtggttaccatttattgccaacgcgttgattaatcacagtgatccgattgaa
agctattatgatagtgatgcagatgaaatgttttgggatatgaatggcacacatgctggt
gaacgtctgcaagaaaaaatggcggaagaattgcgcttattgtacgttgctttaactcga
gcgaaatatcaggtagtgatggcgttgccggaacaatttaaagataattggagcgcgttg
ttatattgccttacgcaaggtcaaatcggcgatcagccgaaaattaaagctaaatttgac
aaaagtgcggtcaatttaattgaagatttaaaatctctgtcaaccaatttagctattgag
gtacaaccgatgactgctttagaagtcttgccgcctttatctgatactgtaccggaagaa
ctattgagtagcgcgtcatttcacgggcatatccaacgggattggcaagtcagtagcttt
agtaaattattggaacaacatcaacgtttgttggcagaacaaaatgctgaacggagtggc
gaaagagcggtggaaatgtcgccaattttcgacgtggcaaaagattatgatcagcaattt
gcgatttcagatgaaatacttaaagaaaccgccgccgaattaatatgtgaggaagcggaa
attgtatcttatcctttgggtttttctcccttcgattttcctcatggtcctcatatcggt
agcgcattgcaccgttattttgagaaaaatgagtttgcgcaatttactgatgcggataag
ttgcacgatttttgccatggattaatgttaagcgaagattgggtagcgcctttgcagcaa
tggtttaatgctattttacatacgccattaattaccaatgaaaacctaagtttggagcaa
atttcgcgtaaaaatgcgttgcgtgagttgcagttttatttacaagtcaaccaaaaattt
agtgcggaaaaatttaacttgttacttgaaaaatatcatcatttaaaatctaacccatta
atttcttatgaatttaatggaatgttacgcggttttatcgatttagtttttcgtcatcaa
ggtaaatattatattatggattataaatccaattttttaggcagcctcgctgccgattat
gctccatcggcattagcgcaaacgatgttaaacagtcattatgattggcaatatttgttg
tattgcgtggcattacatcgttatctgaaatcgcgcgatccggattatcaatatgaacgc
cattttggcggcgtgatttatgcttttttacgcggcatgaatggacaaactgttccgcca
gggcaaaacgggcaggggatattttttgataaacctgacgtacgactcattgaaggattg
gaggagctgttttaa
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