Pantoea agglomerans C410P1: BEE12_18390
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Entry
BEE12_18390 CDS
T04739
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
pagc
Pantoea agglomerans C410P1
Pathway
pagc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pagc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BEE12_18390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagc03400
]
BEE12_18390
DNA repair and recombination proteins [BR:
pagc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BEE12_18390
RecFOR pathway proteins
BEE12_18390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
HHH
RecR_HhH
IMS_HHH
HHH_8
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AOE41655
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All DBs
Position
complement(3988295..3988909)
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AA seq
204 aa
AA seq
DB search
MIGRLRGNILEKQPPLVLLEAHGVGYEIYMPMTCFYELPELQHEAVIFTHFVVREDAQLL
FGFNSKQERALFRELIKVNGVGPKLALAILSGMSAQQFVTAVEKEEIASLVKLPGVGKKT
AERLVVEMKDRFKGMHGDLFGGDSAFTLTTPSAEPETNDAEAEAVAALVSLGYKPQEASR
MISKVGRPDADCETLIREALRAAI
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
gtgataggtcgtttacggggcaacattctggaaaagcagccgccactggtgctgcttgag
gcacacggcgtcggctatgaaatttatatgcccatgacctgtttttatgagttgcctgaa
cttcagcacgaagcggtgatttttacccactttgtggtgcgtgaagatgcgcagctgctg
tttggttttaacagcaagcaggagcgcgcgctgtttcgcgaactgattaaagtgaatggc
gtcggacctaagctggcgctggcgatcctctccggcatgtcggcgcagcagtttgtgacc
gctgttgagaaagaggagatcgcgtcactggtgaaactgccaggcgtgggcaaaaagacg
gctgagcgtctggtggtcgagatgaaggaccgcttcaaaggaatgcacggcgacctgttt
ggcggcgattctgcctttacgctgaccacgccgagcgccgagccggaaaccaatgatgcg
gaagccgaagcggttgcagcgctggtatcactgggttataaaccgcaggaagcgagccgt
atgatcagtaaagtcggtcgaccggatgcggattgcgaaaccctgatccgcgaagcgcta
cgcgccgccatttga
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