Pantoea vagans FDAARGOS_160: AL522_03270
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Entry
AL522_03270 CDS
T04302
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pagg
Pantoea vagans FDAARGOS_160
Pathway
pagg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AL522_03270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagg03400
]
AL522_03270
DNA repair and recombination proteins [BR:
pagg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL522_03270
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AL522_03270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_29
AAA_16
RsgA_GTPase
DnaJ_CXXCXGXG
DUF4350
nSTAND1
AAA_22
nSTAND3
AAA_18
NACHT
Viral_helicase1
cobW
APS_kinase
DUF5351
MeaB
MobB
Septin
Motif
Other DBs
NCBI-ProteinID:
AMG56723
LinkDB
All DBs
Position
unnamed3:complement(136837..139374)
Genome browser
AA seq
845 aa
AA seq
DB search
MTEQDNAHTYRADEHIDPYVSVQGARTHNLRDVSLRFPRNAMVVFTGVSGSGKSSLAFDT
LYAEAQRRFIESVSPHARRLIDQAAAPDVDNIDGLPPAVALQQSRAGAQERSTVGSLTRI
SVTLRLLFSRAGTRPDGVPFMTADYFSPNNPEGACPHCQGLGRVHTVRTEAMVPDRSLSI
RQGAIASWPRGWHNKNLRSILETLGYDVDAPWDALSARDQQWILLTDEQPSVPIFMGLNA
EQREKALAAGEEPAYTGTYTSAAKIVLQSYSGGSETTKKRLARFVTVTPCSECHGKRLNR
NALSVTFAGYDIASLSELSVSELAERLRPYADGSSSDLPAEAALREAVIRMASDICMRLE
QLETLGLGHLAPGRRTTLLSSGELQRVRLATQLISRLFGVLYVLDEPSAGLHPEDVNALL
ASLKNLVRAGNSLVVVEHNIDLIAEADWLIEVGPGPGRHGGEIVYNGEPAGLKDVSASPT
SGYLFSRSYTGLRQRRPAESWLRLEQVHCNNITGVDIAIPLARMTAVTGVSGSGKSTLLN
RVLPEMLGRFDKTSDSKEDEEEDLVPDVKGQVVSGNDAIGRLVRIDQRPIGRTPRSNLAT
YTGFFDIVRRLFAETSEAKVRGFSTSRFSFNLPAGRCPACEGQGQISIELLFMPSATATC
SVCAGSRYNPETLEVKWNNLTIADVLDLTVDDATRVFDGYDGIQRSLSALRSLGLGYLTL
GQPATQLSGGECQRIKLAWELQRVQRTATLYLLDEPSTGLHPSDMDKLLIVLNELVTRGH
TVVMAEHTMRIVAEADWVIDLGPGSGLKGGRIVSSGTPEAISTSAESLTAPWLSAQLKKR
AGDPA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaagataacgcccatacttatcgcgctgatgagcacattgatccttatgtc
tcggtacagggtgcaagaacacacaatctcagggatgtgtcgctgcggtttccccgtaat
gccatggtggtgttcaccggggtttcaggctccgggaaatcctcactcgcctttgacacg
ctttatgcagaagcccagcgccggtttatcgagtcggtttcaccccatgcccgtcgcctg
atcgatcaggccgctgcgccggatgtggataatattgacggactcccgcctgcggtggcg
cttcagcagagccgggctggcgcgcaggagcgttcaacggtgggcagcctgacccgaatt
tccgttacgctgcgcctgctgttttcccgcgcgggcacaaggcctgacggtgtgccgttt
atgaccgccgattatttctcgcctaacaatcctgaaggtgcctgtccgcattgccagggg
ctgggacgggttcataccgtcagaaccgaggcgatggtgccggacaggtcactgagcatc
cggcagggcgccatagcttcatggcctcggggctggcataacaaaaatctgcgcagcatc
cttgagacgctcggctacgatgtcgatgccccctgggatgcgctttcagcccgcgaccag
cagtggatactgctgactgacgagcagccctcggtgccgatttttatgggtcttaacgct
gaacagcgtgaaaaagcgctggcggctggcgaagagcccgcttataccggcacctacacc
agcgcagcaaaaatcgtattgcagagctattccggtggcagcgagacgacaaaaaaacgg
ctggcgcgctttgtcactgtcacgccctgttccgagtgtcacggcaaaaggttaaaccgg
aacgcgctgtccgtgacctttgccggttatgacattgccagtctgagtgagttgtcggtt
tctgaacttgctgaacggctgagaccttatgcagacggttcatcatcagatctgcctgcc
gaggcggcactgcgggaagccgtcatccggatggcgtcagatatctgcatgcggcttgaa
cagcttgagacgctgggacttgggcatctggctccgggacgccgcaccacgctgctctca
tccggcgagttgcagcgcgtacgtctggccacccagctgatatcgcggctgtttggcgtg
ctttacgtgctggatgagccttctgccggtctgcatcctgaggatgtcaacgcgctgctc
gcatccctcaagaatctggtgcgtgcaggtaactcgctggtggttgtcgagcataatatt
gatctcatcgccgaggcggactggctcatcgaagtcggtcccggcccgggaaggcatggc
ggtgagattgtttataatggtgaaccggcaggccttaaagacgtcagtgcctccccaacc
tcaggctatctcttctcccgcagctataccgggctgcgccagcgccggcctgcggagagc
tggctcaggcttgagcaggtccattgcaacaatattaccggcgtggatatcgccatcccg
ctggcgagaatgacggccgtcaccggtgtttccggctccggcaaatcgacgctgctgaat
cgcgtacttccggaaatgctcggacgttttgacaaaacatctgacagtaaagaggacgag
gaagaggatctggtgccggacgttaagggtcaggttgtcagcggaaatgacgccattggc
cgtctggtcagaatcgatcagcgccctatcgggcggacgccacgctccaatctggccacc
tacaccggctttttcgatattgtccgcaggctgtttgcagagacttccgaggcgaaagtc
agaggtttcagcaccagccggttttccttcaatctgcccgcgggtcgctgtcctgcgtgc
gagggacagggacagatttcgattgagctgctctttatgcccagcgccaccgcaacctgc
tcggtctgtgcgggaagccgttacaaccccgaaacgctggaggtgaagtggaacaacctg
accatagcggatgtgcttgatcttaccgtagacgatgccaccagggtgtttgacgggtac
gacgggatccagcgttcactgtcggcactgcgatctctggggctgggatacctgacactg
ggtcagcccgccacgcaactctctggcggtgagtgtcagcgcatcaagctcgcctgggag
ctgcaacgcgtccagcgcacagccacgctttatctgcttgatgaaccgtcaaccgggttg
cacccatccgacatggacaaactgctgattgtgctgaatgaactggtgacgcgcggtcac
accgtcgtgatggcggaacacacaatgcgcattgtggcagaggcggactgggtgattgat
ctggggcccggttcggggctgaagggcggaaggattgtctcgtccggtacgccggaagcg
atcagcacatccgctgagagtctgactgcgccatggctttccgcacagcttaaaaagagg
gcgggcgatccggcgtaa
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