Porphyromonas asaccharolytica: Poras_1502
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Entry
Poras_1502 CDS
T01485
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
pah
Porphyromonas asaccharolytica
Pathway
pah02020
Two-component system
pah02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pah00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Poras_1502
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Poras_1502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pah03021
]
Poras_1502
Transcription machinery [BR:
pah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Poras_1502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
Motif
Other DBs
NCBI-ProteinID:
AEE13435
UniProt:
F4KNC4
LinkDB
All DBs
Position
1923229..1924707
Genome browser
AA seq
492 aa
AA seq
DB search
MLKNRQQQQLEQRQTLTARQIQQIQLLELPVTELEQRISAEIERNPALEEAYTAHDDSNE
SNATNDQIDSSLSQSDQDRLEARNEFGNDDEIPAYRLRMIAEREQQREEIPFAAHGLSLA
DYLDNQLSTLELTERQQLLVPYIVGNLREDGYLDRSLPLIAQDLLLKECVDASEQELTEL
LQIIQSLDPAGVGARSLQECLLLQLHRMEQSETVVNAEKIVSHYFDDFAYKRFERLTKRG
FDQKQLEEVSALIHQLSPKPGNGFDSSAETLLSKVTPDFIITEHEGELTLTLTDQREIPA
LTVSPSYKQMIADYRDASTSERAKLKETIQYTRDRVKDAEWFISALQQRYDTLRTTMTII
MTLQRDFFLSGDIVDLRPMILKDVADLARLDISTISRVSNSKYVQCQWGIYPIKFFFSES
MQAKDGSDVSTKVIKDCLKQIIEREDPLHPLTDDQLTEALSQQGYDIARRTTAKYRQQLG
LPTARLRRKLTK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagaatcgccagcaacagcagctagagcagcgacagaccctcacagcgcgacag
atacagcagatacaactgctggagctacctgtcaccgagctggagcagcgcatcagcgct
gagatcgagcgcaatcctgctctcgaggaggcgtatactgctcatgacgattcaaatgaa
agtaacgcaaccaacgaccagatcgactcctctttgagccagtccgaccaagatcggctc
gaggcgcgcaacgagttcggcaatgacgacgagatcccagcttatcggctgaggatgatc
gccgagagagagcagcagcgtgaggagatcccctttgctgcacacggactatctctcgca
gactacctagacaatcagctctccaccctagagctcaccgagcggcagcagttactcgta
ccttatatagtaggcaaccttcgagaggatggctacctagaccgctcactaccactcatt
gctcaggatctactcctcaaagagtgcgtcgacgcctccgagcaggagctcaccgagcta
ctccagatcattcagagcttagaccccgcaggcgtaggtgctaggtcgctacaagagtgt
ctactgctacaactgcaccgtatggagcagagcgagaccgtcgtcaatgcggagaagatc
gtctctcactacttcgatgactttgcttacaaacggttcgagcgactcactaagcgaggc
tttgaccagaagcaactcgaagaggtgtcggcactcattcaccaactttcccccaagcct
ggcaacggctttgactcctctgctgagacgctcctctcgaaggtgacacccgacttcatc
atcacagagcatgagggcgagctcaccctgaccctcacagaccagcgcgagatacccgcc
ctcaccgtgtcgccaagctacaagcagatgatcgccgactaccgtgatgcgtcaactagt
gaacgagccaagctcaaggagacgatacagtacactcgtgatcgcgtcaaggacgctgag
tggttcatctccgccctgcagcagcgctacgacaccctccgcaccaccatgaccatcatc
atgacgctacagcgagacttcttcctctcgggcgacatcgtagacctgcgtcccatgatc
cttaaggacgttgccgatttagcccgactagatatcagcaccatatcacgtgtgagcaat
agcaagtacgtgcagtgccagtggggcatctaccccatcaagttcttctttagcgaaagc
atgcaagcgaaagatggcagcgacgtctctaccaaagtgatcaaagactgcctcaagcag
atcatcgaaagggaagaccctcttcacccgctcacggacgatcaactcacagaagcactc
tcacagcaaggctacgacatagcgcgtcgcaccaccgctaagtaccgacagcagctcgga
ctccccacagctcgcctgcgtcgcaagctgactaagtaa
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