Pteropus alecto (black flying fox): 102882625
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Entry
102882625 CDS
T02993
Symbol
CHD9
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
pale
Pteropus alecto (black flying fox)
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pale03036
]
102882625 (CHD9)
Chromosome and associated proteins [BR:
pale03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102882625 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
102882625
NCBI-ProteinID:
XP_015442420
LinkDB
All DBs
Position
Unknown
AA seq
2892 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKMTDYEQLNQFDSMKFHQVNQSFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVAD
GSPMWGHQTATGISNQNGSPFHQPGHSHSMHQNKSFVAHHDFALFQANEQHTQCTSLRSQ
QNRNILNPGQNSLSQSKNFMDVNVSGPHRVSVNHPPQITNASSSQQSLSMQQFPQTSTPS
VHFLKCSNRQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHVSPNSLLQSSAVLAPNHA
NQTLSDFTGSNSFSPHRGIKQESTQHMLNPNTSLNSNNFQMLHSSHPQGNYSNSKLSPVH
MNFPDPVDSGTQMGHFNDHVETNGFSSIEENLLHQVESQTEPFTGLDPEDLLHEGLLPQF
DESTFGQDHSSHVLDHDLDRHFTSHLVTRPSDMAQTQLHSQARSWHSSLSNHQHLHERNR
LCLQRQPPSSKKNDGSGTYTKLQNTQVRIMSEKKQRKKVESESKQEKANRIISEAIAKAK
ERGERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKESKKTKTCSKLKEKTKIGKLI
ITLGKKQKRKNESSDEISDVEQMPQHTCKEEDSQKRRSNRQIKRKKYAEDGEGKQSEEEV
KGSVKIKKNLPPLPGEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISPGVMIDTEEFFV
KYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRV
LEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLD
RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITF
LYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQRYEMYFRDS
QGHIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNL
EHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMM
LRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMM
ELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGG
HKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT
RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFD
RASLKLGLDKAVLQSMSGRESHVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEED
IDQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAIS
GRNSLVIDTPRIRKQTRPFSATKDELAELSEVESEGEEKPKLRRPCDRSNGYGRTECFRV
EKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLIT
PTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKK
HIKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSXXXXXXXXXL
IGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKPAPAIF
KDDIEDDVSSPGDLVIADGDGQLMEGDKVYWPTQSALTTRLRRLITAYQRTNKNRQIQQI
QPTFSVPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPDRGQF
DWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEERASRT
LYRIELLRKVREQALRHPHLLERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHGVSRTDY
HILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDAKGVILED
VKVKSENLKEEPPSSEEESMSSEETRTLIKSEPVSPKNGVLPQAPGDQKSGGKGEADRRM
VAARTEPLTPNPASKKQRVRKRGSESSSDSDSDSERSSCSSRSSSSSSSSSSCSHSRSGS
SSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEAQKREGAPHMKAYDEESVASL
STTQDETQDSFQMNNGTPESAYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSA
RRSYDANTVASFYTTKLLDSPGAAAEHSEPSVPTPPGAGLKEEHDQSTQMSKVKKHVREK
EFTVKIKDEGGLKLTFQKQGLAQKRLFDSEDCTLGQQQYLTRLRELQSASETSLASFPKS
VPVSGTSIQSTLGANGIILDNQPVVKKRRGRRKNVEGVDILFFNRNKPPNHVNLGLTTSQ
ISTGINPALSYPQPQGIPDTESPVPVIHLKDGTRLAGDDAPKRKDLEKWLKEHPGYVEDL
GAFIPRMQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLKDL
CRFLKENSEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKSGIAKAAA
AAAATSVAGSPLLANGLLPGMDLTTLQALQQNLQNLQSLQVTAGLMGMPAGLSSGGEAKN
VAALFPMLLSGVTGLPNLLGMGGLLTKPTDSGTEEKKGNDSKELEGKKERTESQNSENGG
ENSVSSSPSTSSTAALNTAAAANSLALNPLLLSNILYPGMLLTPGLNLHIPTLSQSNTFD
VQKNKNSDLGSSKSVEVKEEDSRGRDQEDKGGTEPSPLNENSTDEGSEKADASSGSDSTS
ASSEDSDSSNED
NT seq
8679 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggacttttttgatgatgccaatctttttagtgagaccttagaa
ggtttgtcagatgatgcatttgtacaaccaggacctgtttcactagttgatgaattgaac
ttgggtgcagaatttgaacctttgcacatagactcattgaaccatgttcaaggtactcca
acacatcagaagatgactgattacgaacagttaaatcagtttgactcaatgaaatttcat
caagttaatcagtcttttggtagcccagccgaacatgttttatctccacactctcagttt
aactgttctccgatccacccccaaaaccaacccaatggtttgtttccagatgtagcagat
ggcagtccaatgtggggccatcagacagctactggcatttcaaatcaaaatgggtctcct
tttcaccaaccaggacattctcactctatgcatcaaaataaaagctttgtggcacaccat
gactttgccttatttcaggccaatgaacaacatacacagtgtacttcactgcgctcacaa
caaaacagaaatattctcaacccagggcaaaattctctcagccagtctaaaaattttatg
gatgttaatgtttctggtccacacagagtcagtgttaaccacccaccacagattactaat
gcatcttcttcacagcagtctctttcgatgcagcagtttcctcaaacgtcaactccttca
gtacactttctcaagtgtagcaatcggcaagaaggaaattttaatggaccgtctccaaat
atgacttcttgttctgtcagtaattcgcagcagttttcttcacattattccttttccagt
aatcacgtatcaccgaacagtcttcttcagtcctcggcagttcttgcacctaatcatgca
aatcagactttatcagattttactggaagtaattccttttcacctcataggggaatcaag
caggaatctactcagcatatgctaaatcccaatacatcactgaattcaaataatttccaa
atgttgcattcatcacatcctcagggtaattatagcaattcaaaattatctcctgtgcac
atgaacttcccggatcctgttgactcaggaactcaaatgggccatttcaatgatcatgta
gaaactaatggcttttcatccatagaagagaatttacttcatcaagtggagtctcaaact
gagccattcacaggacttgacccagaagacctccttcatgagggtctccttccccaattt
gatgagtcaacatttgggcaagatcattcaagtcatgttttagatcatgaccttgatcgg
cactttacttcccatcttgtaacacggccttctgacatggctcaaactcagttgcatagt
caggctcggagctggcattcatcactttctaatcatcaacatttacatgagagaaatcgc
ctatgtttacagcgacagcctccatcttccaagaagaatgatggttctgggacatatact
aagttgcagaatacccaggtgaggatcatgtctgagaagaagcagagaaaaaaggtggaa
tcagaaagcaagcaagaaaaggctaatcgtataatatcagaagccatagccaaagcaaag
gagcgcggggagcgcaatattccacgagtcatgagccctgaaaactttcctagtgcttca
gtcgaaggaaaggaggaaaagaaaggtagaaggatgaaatccaagccaaaggacaaagag
agcaaaaaaacaaaaacttgttctaagttgaaagagaagacaaaaattggcaagcttatt
attacattgggtaaaaaacaaaaaagaaagaatgagtcttcggatgaaatatctgatgtg
gagcagatgccacagcatacatgcaaagaggaagactctcaaaaaagaagatcaaatcga
caaatcaaaaggaaaaagtatgcggaagatggagaggggaaacaatctgaagaagaggtt
aaaggctctgtgaaaataaaaaagaatttacctcctttacctggtgaacagcctttacag
ttatttgtggaaaatccaagtgaggaagatgctgcaattgtagacaaaatattatcttcc
agaattgtgaaaaaggaaatatcacctggagtgatgattgatacagaagaattttttgta
aaatacaagaattactcctatcttcactgtgagtgggccacagaacagcagctcctgaaa
gataaaaggatccagcagaaaatcaaacgattcaaattgagacaagcacaaagagcacat
ttttttgcagatatggaagaagaaccatttaacccagactacgttgaagtagacagggtg
ttagaagtctctttttgtgaagacaaagatactggtgagcctgttatttactacttagta
aagtggtgctcattgccatatgaagatagtacctgggaactaaaagaagatgtagatctt
gcgaaaatagaagagtttgaacaattgcaagcgtcaagacctgacacaagacatttggat
cgtcctccctctaatatttggaaaaaaatagatcaatccagggactataaaaatggcaac
caactcagggaatatcaactggaaggactcaactggctcttgttcaattggtacaataga
cgaaactgcattttagcagatgaaatgggtcttggcaaaaccattcaatcaattacattc
ctctatgaaatccttctgactggtataagaggacctttcctgattattgctccactttct
accattgcaaactgggagagagaatttcgtacgtggactgatattaatgttgtggtttat
catgggagcctgattagcagacagatgatacagcgatatgagatgtacttcagggactca
caggggcatattattcgaggagcttatagattccaagccatcatcaccacttttgaaatg
attcttggaggctgtggagagcttaatgcaattgaatggcgatgtgtgatcattgatgaa
gcacataggttaaaaaataaaaattgtaaacttctagaaggtctcaaactcatgaatctg
gaacacaaggtgcttttgactggcacacctctccaaaatacagttgaagaactattcagt
cttcttcactttctagaacccttaaggtttccttctgaatcaacatttatgcaagagttt
ggggatctgaaaacagaggagcaggtgcagaaacttcaggctatcctgaaaccaatgatg
ttgagacgattgaaagaagatgtagaaaagaagttggcccctaaggaagaaaccatcatc
gaagtagaacttaccaacattcaaaagaaatactaccgggctattttggagaagaacttt
tcatttttatccaaaggagcagggcagactaatgtacctaacttggtcaacaccatgatg
gagctcaggaagtgctgtaatcatccatatcttatcaaaggtgctgaggagaaaatactt
ggagaatttagagatacatataatccagctgcttctgattttcatcttcaagcaatgatc
caatctgctggaaaactggtccttattgataaattacttcccaaaatgaaagcaggaggt
cataaagtgctcatcttctctcagatggtacgctgccttgacatcctggaggattatctc
atacataaaagatatttgtatgagcgaattgatggaagagtcagagggaatcttcgacaa
gctgctatagatcgatttagtaaacctgattcagatcgatttgtttttcttctgtgtacc
cgagctggtggattgggcatcaacttaactgcagctgatacatgtataattttcgattca
gattggaatcctcagaatgatcttcaggcccaagcccgttgtcacagaatcggtcagaat
aaagcagtgaaagtctaccgactagtaactcgtaattcatatgagcgagagatgtttgac
cgagccagtctgaaactgggtctagataaggctgtgttacagagcatgagtggaagagaa
agtcacgttggtggcattcaacagctttccaaaaaggaaatagaagatcttcttcgtaga
ggtgcttatggtgctattatggaagaagaagatgaaggttctaaattctgtgaggaggat
attgatcagattttactacgtcgtacaaaaactattacaattgagtcagaaggacgcggg
tcaacatttgctaaggcgagttttgtggcatctggaaaccggacagatatttccttggat
gatcccaatttctggcaaaaatgggctaaaaaagcagaaatagatatagatgccatcagt
ggcagaaacagcttggttattgacactccaagaattcggaagcagacgagaccctttagt
gccaccaaagatgaactggctgaattatctgaagttgaaagtgaaggagaggagaagccc
aaactccggagaccctgtgaccgttccaacggctatggaagaaccgaatgcttccgagtc
gagaaaaacctgctggtttatggatggggccggtggagagagattctgtctcatggtcgt
tttaaaaggcagcttaacgagcatgatgtagaaataatttgccgagccctcttagcgtat
tgccttgttcattaccgaggagatgagaaaattaaaggcttcatttgggatctcattact
ccaactgaagatgggcagacacgagagttacaaaatcatctaggcctatcagctcctgta
cccaggggccgaaaagggaagaaagtaaagactcaaacaagctcatttgatatacagaaa
gcagaatggcttcgaaaatataatcctgagcagctacttcaagatgaaggctataaaaaa
cacataaaacaccactgtaataaagttttgcttcgtgtaagaatgctctattatctaaag
caagaagtcattggaaatgagtgtcagaaagtatttgatggagttgatgcaagtgacatt
gatgtttgggtcccagaaccagaccactcannnnnnnnnnnnnnnnnnnnnnnnnnnctt
atcggagtttttaaacacggttatgagaaatataacacgatccgagcagatccagcatta
tgcttcttggagagagtggggaaacctgacgaaaaagcagttgctgcagaacagagagcg
aatgattacatggatggggatgtggaagatccggaatacaaacctgccccagctatcttt
aaagatgatatagaggatgatgtttcctcgccaggagatcttgttatagcagatggagat
ggtcagctgatggaaggtgataaagtttattggcctactcagtcagctttaaccacacgt
ttgaggcgtctgatcactgcatatcagcgtactaataaaaacagacaaatccagcagata
caacctactttctcggtgcctgccagtgtgatgcagcctctttatgaagaagccactctt
aaccctaaaatggcagccaagatagaaagacagcagagatggacaagaagagaagaagct
gacttttacagagttgtatctacatttggagttgtatttgatcctgacagaggccagttt
gattggacaaaatttagagccatggcgaggctccataagaaaaccgatgatagcttggag
aagtatttgtatgcatttatgtctatgtgtcggagagtttgccgtcttccttccaaagaa
gaattggtggatccaaatatttttattcagccgatcacagaagaacgtgcttctaggact
ttgtatcgcattgaacttctaaggaaagtgcgggaacaggcactccgacatccacactta
ttggaacgcttgaagctgtgccatccaaatccagacttaccagtctggtgggaatgtggc
cctcatgatagggacttgcttattggagcagctaaacacggggtgagccgaacagactat
cacattcttcgtgatcctgaactctcatttatggcagcccagaggaactacagtcaaagt
aagatggctcattcaaggacgtccaccccacttttacagcaatatcaagtagcactttct
gcttctcctcttacctctctgcctaggctcctagatgccaaaggtgttattctagaggat
gtgaaagttaaaagtgaaaaccttaaagaggagcctccatcttcggaagaagaatctatg
tcttctgaggaaaccaggacactaataaagtctgagcctgtaagtccaaagaatggtgtg
ttaccacaggctcctggagaccagaaatccggtgggaaaggtgaggctgacaggcgcatg
gttgcagccagaacagagcccctaactccaaacccagcctctaagaagcagcgggtccgc
aaaaggggatcagaatctagttccgactcggactccgactccgagagatcgtcctgctca
tccaggtcatcttcttcctcgtcttcctcctcttcctgctcccactcgaggtcgggctct
agttcctcctcctcctcttcttgttcttcagcgtcctcctcctcctcctcatcctcatcc
tcctcctcatcctcctcttcatcttcatcggaagaaagcgacagcgaagaagaggaagcc
caaaagcgagaaggtgcccctcacatgaaagcctatgatgaagagagtgtcgcatcactg
agcaccacccaggatgagacccaggacagtttccagatgaacaatgggacaccggagtct
gcttacttattacaaggtggatacatgctggcagcttcatactggccaaaggatcgtgtg
atgatcaaccgattggatagtatttgtcaaacggttctgaaagggaagtggccttcagct
agaagaagttatgatgccaacacggtggcttctttctataccacaaagctgttggacagc
cctggcgcagctgcagagcacagcgagcccagtgtgcccactccgccaggcgccggcctt
aaagaagagcacgatcagtcaacacagatgtcaaaggtgaagaagcatgtacgagaaaag
gagtttacagtgaaaatcaaagacgaaggtggtttgaagttgacatttcagaagcaaggg
cttgctcagaaaaggctgtttgacagtgaagattgcaccctgggacagcagcagtacctc
actcgactgcgggagcttcagagtgcgtcagagaccagccttgccagtttcccaaaatct
gtgcccgtgtcaggtacttccattcaatcaactcttggtgccaatggaattatattagac
aaccagcctgtagtcaaaaaaaggcggggaaggaggaagaatgtggaaggtgttgacatc
ctcttttttaacagaaataaaccacctaatcatgttaacttgggcttaaccacctcacag
atttctacagggataaatccagcactgtcttatcctcaacctcaaggaattcctgatacg
gaaagtccagttcctgttattcaccttaaagatgggaccagacttgcaggcgatgatgca
ccaaagagaaaggatttggaaaaatggcttaaggagcacccaggttatgtggaagattta
ggagcttttattcctagaatgcagctccatgaggggaggcccaaacaaaaaaggcatcgt
tgcagaaaccccaataaactagatgttaatagtcttactggagaagaacgtgttcagttg
attaacagaagaaatgccagaaaggttggaggtgcatttgctccccctttgaaagattta
tgtagattcttgaaagaaaattcagagtacggagtcgctcctgaatggggagatgttgtt
aaacagtctggctttcttccggaaagcatgtacgaacgaattctcactggtcctgtggtg
agagaagaagtaagcaggcgaggaagacggcctaaaagcggaatcgccaaggccgcggcg
gcagcggctgccaccagcgtcgcgggcagtcctctgttagccaatggattacttccaggt
atggatctcacaactcttcaggccttacaacaaaacctacagaacttgcagtcactgcag
gtcaccgcggggttgatgggaatgcctgccggcctttcttctggaggagaagctaaaaac
gtggctgccctgttccccatgctgctgtcaggagtgacgggattaccaaacctgttgggc
atgggagggctcctgacaaagcctacagactctggaacagaagaaaaaaagggaaatgac
tctaaggagctagaaggaaaaaaagaaaggacagagagccaaaactcagagaatggtgga
gaaaactctgtgtcaagttctccgtcaacatcctctactgctgcattaaatacagctgca
gctgccaactcgttagctcttaacccactgttactatctaatatactttatccagggatg
cttctcactccaggccttaatcttcatattccaactttatcccagtccaatacttttgat
gtacagaaaaacaaaaacagtgacttaggctcatctaagtctgtagaagtaaaggaagaa
gattccagaggtagagatcaggaggacaaaggggggactgaaccaagtcctctcaatgaa
aacagcacagatgagggttcagagaaagccgatgcttcgtctggctctgacagtacatca
gcgtcatccgaggattcagattctagtaacgaagactga
DBGET
integrated database retrieval system
