Parasphingopyxis algicola: HFP57_15455
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Entry
HFP57_15455 CDS
T06669
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
palg
Parasphingopyxis algicola
Pathway
palg00300
Lysine biosynthesis
palg00550
Peptidoglycan biosynthesis
palg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HFP57_15455
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HFP57_15455
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
palg01011
]
HFP57_15455
Enzymes [BR:
palg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HFP57_15455
Peptidoglycan biosynthesis and degradation proteins [BR:
palg01011
]
Precursor biosynthesis
Amino acid ligase
HFP57_15455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
DUF6668
Motif
Other DBs
NCBI-ProteinID:
QLC26288
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All DBs
Position
3108695..3110116
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AA seq
473 aa
AA seq
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MKLGTLIGSGPGDGPVVTGFAIDHRKVAPGTIFGAFQGARFNGEDYINDAIDSGAIAIVS
RPDARVEGVPRIADEEPRRAFAQLAAKFFAPFPETCAAVTGTNGKTSTVELTRQLWRMTG
HHAASIGTLGVTTADDQVKTGLTTPDIVTFLSNAAGLKREGVTHLAFEASSHGLSQYRTE
GLPVTAAAFTNLSRDHLDYHGTMEAYLAAKIRLFSEVVNGDGTAVVWADDPASAEVLATV
GERGLRTLSVGAHGDAIRLVDRTPTQLGQTLEVEAEGKTHTIALPLIGAYQANNALVATG
LVWATGGDLEATLDGLARVQPVRGRLERAVITKAGAPVYVDYAHTPDALEAAIDALRWHA
KGRLITLFGAGGDRDTGKRPLMGAVASRLSDSVIVTDDNPRSEDPAKIRAAILAGADDAI
EVAGRREAIAAAIESAKAEDIVLLAGKGHEQGQEIGDRILPFDDVDVARECAA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcggtacgctcatcggatccggcccgggcgacggcccggtggtgaccggtttt
gcgatcgaccatcgcaaggtcgccccgggcacaatcttcggcgcgttccagggcgcgcgt
tttaacggcgaggattatataaacgacgccatcgattccggcgcgatcgccattgtctcg
cgccccgacgcccgggtggaaggtgtgccgcgtatcgccgacgaagagccccggcgcgcc
tttgcgcagctcgccgccaaattctttgcgcccttccccgaaacctgtgccgcggtgacc
gggaccaacggcaagacgtcgaccgtcgaactgacgcgccagttgtggcggatgaccggc
caccacgccgcatcgatcgggacgctcggcgtgacgacggcggacgaccaggtgaagacc
ggtcttacgacgcccgacatcgtaacctttctttccaatgccgcgggcctgaaacgcgag
ggcgtgacccatcttgcgttcgaagcatcgagccacggactgtcgcaataccgcaccgag
gggctgcccgtgacggcggccgccttcaccaatctgagccgcgatcatctcgattatcat
gggacgatggaggcctatctggcggccaagattcggctgttctccgaagtcgtgaacggc
gacggtacggcggtcgtctgggccgacgacccggcgagcgccgaggtgctggccacagtg
ggggagcgggggctccgcacgctgtcggtgggcgcacatggcgacgcgatccggctggtc
gaccgaacgccaacccagctcgggcagaccctggaagtcgaagcggaaggcaagacgcac
accatcgcgctgccgctgatcggggcctatcaggcgaacaacgcgctggtcgcgaccggg
ctcgtctgggcgacgggtggcgatctggaagcgacgctcgacggtctcgcgcgggtccag
ccggtgcgcgggcggctcgaacgcgcggttattaccaaggcgggcgcgccggtctatgtc
gactacgcccatacgcccgatgcgctcgaagcggcgatcgatgcgttgcgctggcatgcc
aagggacggctgatcaccctattcggcgcgggcggcgatcgggatacgggcaagcgtccg
ctgatgggcgcggtcgcttcgcgcctctccgacagcgtgatcgttaccgacgacaatccg
cgatccgaagatccggcgaagatccgggccgccattctcgcgggagccgatgatgcgatc
gaagttgccggccgccgtgaagcgatcgcggcggcgatcgaatccgccaaagccgaggat
atcgtgctgttagccggcaagggccatgagcagggtcaggaaatcggcgaccggatcctg
ccgttcgacgatgtggatgtcgcccgggagtgcgcggcgtga
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