Pantoea alhagi: B1H58_03880
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Entry
B1H58_03880 CDS
T05014
Name
(GenBank) DNA-binding transcriptional repressor DeoR
KO
K11534
DeoR family transcriptional regulator, deoxyribose operon repressor
Organism
palh
Pantoea alhagi
Brite
KEGG Orthology (KO) [BR:
palh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palh03000
]
B1H58_03880
Transcription factors [BR:
palh03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
B1H58_03880
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_23
HTH_Mga
HTH_11
Sigma70_r4_2
Nuc_rec_co-act
HTH_8
HTH_17
Sigma70_r4
DNA_pol3_delt_C
MerR
Motif
Other DBs
NCBI-ProteinID:
ARJ41230
UniProt:
A0A1W6B2B4
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All DBs
Position
831030..831794
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AA seq
254 aa
AA seq
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METRRDERINKLAQALKRIDKIHLKEAARLLGVSEMTIRRDLNEQPSCLVLLGGYIVSDP
RNAHGHYFVSDQQLHNVNKKRQLAQRAASLIKPNDTVFFDCGTTMPWVIDAIDEGLPFTA
VCCAINTFLALKEKSACRVILSGGEFHPDNAVFSPHGNLSILDEICPTLAFISAAGIDLQ
QGVTCYNFNELPMKLRAMARAQRKVLLADSSKFNKVLPARIGELDQFDTLISDSAPPQAL
AEHLQQQAVTLLLP
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccggcgcgacgagcgaattaataaactggcgcaggcgctcaagcgcatcgat
aaaattcatttgaaagaggcggcgcggctgttaggcgtttcagaaatgacgatccgtcgc
gatcttaacgagcagccctcctgcctggttttactcggcggctatatcgtgagcgatccg
cgaaatgcgcacgggcactattttgtttccgatcagcaactgcataacgtcaataaaaaa
cgccagctggcacagcgggcggccagcctgattaaacctaacgatacggtttttttcgac
tgtggcaccactatgccgtgggtgatcgatgcgatagatgaaggtttgccctttaccgca
gtctgctgcgccattaatacctttctggcgcttaaggaaaaaagcgcctgtcgcgttatt
ctcagcggcggcgagtttcatcctgacaacgcggtgttttctccgcacggcaacctctct
attctggatgagatctgccctacgctggcgtttatttccgctgccggtattgacctacaa
cagggcgtcacctgctacaacttcaatgagttaccgatgaagcttcgggcgatggcacgc
gcgcagcgcaaggtgttgctggctgacagcagcaagtttaataaagttctgccggcgcgc
attggcgagctggatcagtttgatacgctgatcagtgacagtgcgccgccgcaagcgctg
gctgagcacctgcaacagcaggcggttacgctgctgctgccctga
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