KEGG   Pseudomonas alkylphenolica: PSAKL28_02840
Entry
PSAKL28_02840     CDS       T03238                                 
Name
(GenBank) sigma-54 dependent response regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
palk  Pseudomonas alkylphenolica
Pathway
palk02020  Two-component system
Brite
KEGG Orthology (KO) [BR:palk00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSAKL28_02840
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:palk02022]
    PSAKL28_02840
Two-component system [BR:palk02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   PSAKL28_02840
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_50 AAA_2 FleQ HTH_8 AAA DUF6716 HTH_24 HTH_10
Other DBs
NCBI-ProteinID: AIL59521
UniProt: A0A077F834
LinkDB
Position
complement(315807..317219)
AA seq 470 aa
MTTEPLIDSRVQVILVDDDPHLRQALSQTLDLAGLNVLSLSDAQNLAARIEQDWPGVLVS
DIRMPGIDGLQLLQQVHAQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLD
SVRRALALRRLVLDNRSLRLALSDRQQLSTRLVGHSTPMLRLREQIGALAGTRADVLILG
ETGAGKEVVARALHDLSSRRDGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKF
EFANGGTLFLDEIESMSLDVQVKLLRLLQERVVERLGGNQQIPLDIRIIAATKEDLRQAA
DQGRFRADLYYRLNVAPLRIPPLRERGDDILVLFQHFADAASERHGLPANSLQPAQRALL
LRHNWPGNVRELQNAAERFALGLELALDGEAPAPAHEQPVTATSGNLSDQVEQFERSLIA
AELAQPHSSMRSLAEALGIPRKTLHDKLRKHGLSFADSNTSPDEMEDNRP
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgacgaccgagccgctcatcgacagccgcgtacaggtgattctggtcgacgacgaccca
cacctgcgccaggccctgagccagaccctggatcttgccggtctcaacgtcctgtcgctg
agcgatgcgcagaacctggccgcacgtatcgaacaggactggcccggcgtgctggtcagc
gatatccgcatgcctggcattgatggtctgcagctgttgcaacaggtgcacgctcaggac
ccggagctgccggtgctgctgattaccgggcacggtgatgtgccgctggcggtccaggcc
atgcgtgcgggcgcctatgattttctcgaaaaacccttcgccagcgacgccctgctcgac
agcgtgcgccgcgccctggccctgcgccgcctggtgctggacaaccgcagcctgcgcctg
gccctgagcgaccgccagcaactgagtacccgcctggtcggtcactccacccccatgctg
cgcctgcgcgagcagatcggcgctctcgccgggacccgcgccgatgtgctgatcctcggc
gagaccggtgccggcaaggaagtggtcgcccgcgccctgcatgacctgtcgagccgtcgc
gacggcccgttcgtggcgatcaacgccggcgccctggccgaatcggtggtcgaaagcgaa
ctgttcggccacgagccgggggcattcaccggggcgcagaaacgccggatcggcaaattc
gagtttgccaatggcggcacgctgttcctcgacgaaatcgagagcatgagcctggacgta
caggtcaagctgctgcgtctgctgcaggagcgcgtggttgaacgtctgggcggtaaccag
cagatcccgctggacatccgcatcatcgccgccaccaaggaagacctgcgtcaggccgcc
gaccaggggcgtttccgcgccgacctgtactaccgcctgaacgtcgcaccgctgcgcatt
ccgccgctgcgtgaacgcggcgatgacattctggtgttgttccagcatttcgccgatgcc
gcgagcgaacgccacggtctgccagcgaacagcttgcagccggcacagcgcgcgctgttg
ctgcgtcacaactggccaggcaacgtacgtgaactgcagaatgccgccgaacgcttcgcc
ctcgggctggagctggcgctggacggtgaggcgcctgcgccggcccacgaacaaccggtc
actgccaccagcggcaacctcagcgaccaggtcgagcaattcgaacgctcgctgatcgcc
gccgaactggcccagccgcacagctccatgcgcagccttgccgaagcactgggtattcca
cgcaagaccctgcacgacaaactgcgcaaacatggcctgagcttcgccgacagcaatacc
agccctgacgaaatggaggataaccgcccatga

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