Pseudomonas alkylphenolica: PSAKL28_09210
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Entry
PSAKL28_09210 CDS
T03238
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
palk
Pseudomonas alkylphenolica
Pathway
palk00300
Lysine biosynthesis
palk00550
Peptidoglycan biosynthesis
palk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSAKL28_09210
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSAKL28_09210
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
palk01011
]
PSAKL28_09210
Enzymes [BR:
palk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PSAKL28_09210
Peptidoglycan biosynthesis and degradation proteins [BR:
palk01011
]
Precursor biosynthesis
Amino acid ligase
PSAKL28_09210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
ADH_zinc_N
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
AIL60152
UniProt:
A0A077F3U8
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All DBs
Position
1007279..1008742
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AA seq
487 aa
AA seq
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MTMPLSKLFAQASRDPLIRELTLDSRKVRPGDLFLAVPGAQVDGREHIADALKRGAAAVA
YEAQGTTVLPITEVPLIPVKGLIAQLSDIAGRFYGEPSRQLDLVGVTGTNGKTSVTQLVA
QALDKLGQRCGLIGTLGTGFYGELQSGRLTTPDPIAVQATLNDLKKGGAKAVAMEVSSHA
LDQGRVAALEFDIAVMTNLSRDHLDYHGSMQAYEDAKARLFAWPNLRCRVVNLDDDFGRR
LAAEKGESRLISYSLKDSAASLYCREAHFDDDGVRAVIVTAQGEHSLRSRLLGRFNLSNM
LAAVGTLMALDYALDEILAVTPALEGPIGRMQRLGGGSKPLVVVDYAHTPDALEQVLQAL
RPHAKGQLLCLFGCGGDRDRGKRPLMAEVAERLADRVLVTDDNPRSEDPQQIFADIRPGF
AKADAVEFVAGRGTAIAQLIASAGVDDVIVLAGKGHEDYQEINGQRHDFSDLVEAEKALA
VWEAPHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgccattgagtaagcttttcgcccaggccagccgcgatccgttgattcgcgag
ctgactctggacagccgtaaagtccgtccgggtgacctgttcctggcggtccccggagcg
caggtcgatggtcgcgagcacattgccgatgcgctcaagcgtggcgcggcagctgtggcc
tatgaagcgcaaggcacgaccgtgttgccgattaccgaagtgccgctgattccggtcaag
ggcctgattgcccagttgtcggatattgccgggcgcttttatggcgagccgagccgtcag
ctggatctggtcggtgtcactggtaccaacggcaagaccagcgtcactcagctggtggcc
caggccctggacaaactcggtcagcgctgtggcctgatcggcaccctgggcacgggattc
tatggcgaactgcaaagcggtcgcctgaccacgccggatccgattgccgtgcaggcgacc
ttgaatgatctgaagaagggcggggcgaaagccgtcgccatggaagtttcttcccacgcc
ctggatcagggccgggttgcggcgctggaattcgacatcgcggtaatgaccaacctgtcg
cgtgatcacctggactaccacggcagcatgcaggcctacgaagacgccaaggcgcgtctg
ttcgcctggccgaaccttcgttgccgggtggtcaatctagatgatgacttcggtcgtcgg
ctggcggccgagaagggcgagtcgcgactgattagctacagcctcaaggacagcgccgct
tcgctgtactgccgcgaagcgcattttgacgatgatggtgtgcgtgcagtgatcgtcact
gcccaaggcgagcattccttgcgcagccgcctgcttggccgcttcaacctgagcaacatg
ctggcggcggtcggaaccctgatggcgctggactatgcgctggatgaaattctcgccgtc
acccctgcgctggaaggcccgatcggccgtatgcagcgcctgggcggtggcagcaaaccg
ctggtggtggtcgattacgcccacactcctgatgccctggagcaagtacttcaagccctg
cgcccgcacgccaaaggacagctcctgtgcctgttcggctgcggtggcgatcgtgatcgt
ggcaagcgtccgttgatggccgaagtggccgagcgccttgccgaccgtgtgctggtcact
gacgacaacccacgtagcgaagacccgcagcagatctttgctgatatccgtccaggtttc
gccaaggccgacgcggtcgagttcgtcgccgggcgtggtactgccattgcccagttgatt
gccagcgccggtgttgatgatgtcatcgtcctggctggcaaaggccacgaggactatcag
gaaatcaacggtcagcgtcacgacttttccgacctggtcgaagctgagaaagcgctcgca
gtctgggaggcccctcatgcttaa
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