Pseudomonas alkylphenolica: PSAKL28_09280
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Entry
PSAKL28_09280 CDS
T03238
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
palk
Pseudomonas alkylphenolica
Pathway
palk00470
D-Amino acid metabolism
palk00550
Peptidoglycan biosynthesis
palk01100
Metabolic pathways
palk01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSAKL28_09280
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSAKL28_09280
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PSAKL28_09280
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
palk01011
]
PSAKL28_09280
Enzymes [BR:
palk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PSAKL28_09280
Peptidoglycan biosynthesis and degradation proteins [BR:
palk01011
]
Precursor biosynthesis
Amino acid ligase
PSAKL28_09280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
ATPgrasp_YheCD
RimK
ATP-grasp_5
TTL
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AIL60159
UniProt:
A0A077F8F4
LinkDB
All DBs
Position
1016261..1017220
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AA seq
319 aa
AA seq
DB search
MTDNAYATLHSTIAAKDFGRVAVLYGGKSAEREVSLKSGAAVIEALTSAGVDVVAIDVGD
DLLDRLQSEKIDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVW
HSLGIPTPRHAVLTSEADCISAGAELGFPLIVKPAHEGSSIGMAKVNGVDELIAAWKDAA
TYDSQVLVEQWIHGPEFTVATLRGQVLPPIALGTPHTFYDYDAKYLASDTQYRIPCGLSA
EKENELIDLTARACDAIGIAGWGRLDVMQDEQGRFWLLEVNTAPGMTDHSLVPMAARAAG
LDFQQLVLAILAASVEARG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgactgataacgcatacgccacattgcactcgaccattgccgcgaaagacttcggccgc
gttgccgtgctttacggcggcaagagtgccgaacgcgaagtttcgctgaagtccggggca
gcagtcatcgaagcgctgaccagcgccggtgtcgacgtggtcgcaatcgatgtgggcgat
gacctgctcgatcgcctgcaaagcgagaagatcgaccgtgccttcatcatcctccacggc
cgtggcggtgaagacggcagcatgcagggcctgctggagtgtctgggcatcccttacacc
ggcagtggcatcctcgcttcggcgctggccatggacaagctgcggaccaaacaggtctgg
cacagcctgggtattccgaccccgcgtcatgccgtgctgaccagcgaagccgactgtatt
tctgcaggtgcggaactgggcttccctttgatcgtcaaaccggcccatgaaggctccagt
atcggtatggcgaaagtgaacggtgtcgacgaattgatcgccgcctggaaggacgccgct
acctacgattcgcaagtgttggtcgaacaatggattcacggtccggagttcaccgtggcg
accctgcgtggccaggtattgccaccgatcgcgctgggcacgccgcacactttctacgac
tacgacgccaagtacctggcttccgatacccagtaccggatcccgtgtggcttgagcgcg
gagaaggaaaacgaactgatcgacctgaccgcccgtgcctgcgacgccatcggcatcgct
ggctgggggcggctggacgttatgcaggacgagcaggggcgtttctggctgctcgaagtc
aacaccgcaccaggcatgacggatcacagcctggtccctatggcggcacgcgcggccggt
ctggacttccagcaattggtgctggcaatcctggcggccagcgtcgaggcgcgaggttaa
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