Pseudomonas alkylphenolica: PSAKL28_24480
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Entry
PSAKL28_24480 CDS
T03238
Name
(GenBank) Fis family GAF modulated sigma54 specific transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
palk
Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palk03000
]
PSAKL28_24480
Transcription factors [BR:
palk03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSAKL28_24480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
PAS_4
AAA_5
HTH_30
PAS_9
AAA_2
Mg_chelatase
HTH_1
AAA
AAA_16
PAS
HTH_22
HTH_28
HTH_7
HTH_20
HTH_29
HTH_23
AAA_22
AAA_7
Mga
HTH_11
PAS_8
HTH_50
DUF815
HTH_17
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AIL61659
UniProt:
A0A077FCU9
LinkDB
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Position
2734615..2736522
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AA seq
635 aa
AA seq
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MARHIPITIATDPLQTSRMARLKLVSEGALPQGMLREEIDASWRRSLGHGLSCLASDEVE
LGVRQRLQELLDGNRLLIDAATPEMEYLVARQGNSGMIILGDAQANILAIGGQTTELNQA
GLRDLHPGSCWSESSRGTNAIGTAVVEGRPTLINCGEHYLDRLSPFSCTSVPLRDPQGHV
IGVLDLTREGIMAQPQDNLSTLIMAASNIESRMFGLCYPDQLVLSFHNRAQYLGSAWHGL
LALSLDGEVLAANERACELLQLARPALLGRRCSELMGERTSAFLTRLWSDRVNSVQTAKG
EFFFRAVHLPQRAAMSTPRALGKAIPAPKPAQPESLAGSDARLARALRMACRGLNNDLPV
LLLGETGTGKEVVARALHQSSPRADKPFVAVNCAAIPEGLIESELFGYREGAFTGSRRGG
MVGRLMQAHGGTLFLDEIGDMPLALQARLLRVLQERRVAPLGGGDEQDIDVAVICATHRD
LKRLVLDQHFREDLYYRINGVSVQLPALRDRDDLSEVIDSLLGKFGAEGVGLDKGLRELL
GNFDWPGNIRQLEMVLRSALAMREPGEQVLSLEHLTDCLLDELTASTQQTGSIRENEVEL
IRGALARHQGNVSAAADALGISRATLYRKLKQLRG
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgacatataccaataacaattgctaccgatccattgcagacatcgcgcatggcc
cgcctgaaacttgtcagtgaaggcgccttgccgcagggcatgctacgcgaggaaattgat
gcctcgtggcggcgcagcctgggccatggcctgagctgcctggcctccgatgaggtcgag
ctgggcgtacgtcagcgcttgcaggagctgctcgacggtaaccgtctgctgatcgacgcc
gctacaccggaaatggaatacctggttgcccgccaaggcaacagcgggatgatcattctc
ggcgatgcgcaggccaacatcctggccatcggtggccagacgaccgagctcaaccaggcc
ggcctgcgcgacttgcatccaggcagttgctggagcgagtcgagccgtggcaccaacgcc
atcggtacggctgtggtcgagggccgcccgaccctgatcaactgcggcgagcattacctg
gaccgactcagcccgttttcctgcacctcggtgccgctgcgcgatcctcaggggcatgtg
atcggcgttctcgacctgacccgcgaaggcatcatggcccagcctcaggacaacctctcc
acactgatcatggcggccagcaatatcgagagccggatgttcggcctgtgctatcccgat
cagctggtgctgtcatttcacaaccgtgcgcaataccttggcagtgcctggcacggcctg
ctggcgctgagccttgacggcgaggtgctggcggcgaacgagcgcgcctgtgaactgctc
cagctggcgcgtccggcgctgcttggcaggcgttgcagtgagctgatgggcgaacgcaca
tcagccttcctcacccgcctgtggagcgaccgggtgaacagcgtgcagaccgccaagggc
gagtttttcttccgcgcggtacacctaccgcagcgtgccgccatgagtacgccgcgagcc
cttggcaaggcgatccccgcgcctaaacctgcgcaaccggaaagcctggccggcagcgat
gcacgcctggcccgggccctgcgcatggcttgccggggcctgaacaatgatctgccggtg
ctgttgctgggcgagaccggtaccggcaaggaggtcgtggcgcgcgccttgcaccagtcc
agcccgcgtgccgacaaaccctttgtcgcggtcaactgcgccgccatcccggaaggtctg
atcgagtccgagctgttcggctatcgcgaaggcgccttcactggctcgcgccgtggcggt
atggtcggccggctgatgcaggctcacggcggcaccctgtttctcgacgaaatcggcgac
atgccgctggccctgcaggcgcgcctgctcagggtgctgcaggagcgccgggtcgcgccg
cttggcggcggcgacgagcaggacatcgacgtggcggtgatctgtgccacccaccgcgat
ttgaaacgcctggtactcgaccagcactttcgtgaagacctctactaccgcatcaacggc
gtaagcgtgcagttgccggcgttgcgcgaccgtgacgacctgagcgaggtcatcgacagc
ctgctgggcaagttcggcgccgaaggtgtcggcctggacaagggcctgcgcgagttgctc
ggcaacttcgactggccgggcaacatccgtcagctggaaatggtcctgcgctcggcgctg
gccatgcgcgagccaggtgagcaggtgctgagcctggagcacctgaccgactgcctgctc
gatgaactgactgccagtacgcagcaaaccggcagcattcgtgagaacgaggtggagttg
atccgcggcgccttggcgcgccatcagggcaatgtctcggcagcggccgatgccctgggt
atcagccgtgccacgctgtaccgaaaactcaagcaactgcgcggatga
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