Pseudomonas alkylphenolica: PSAKL28_28200
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Entry
PSAKL28_28200 CDS
T03238
Name
(GenBank) leucine rich repeat domain protein
Organism
palk
Pseudomonas alkylphenolica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6543
NEL
LRR_8
LRR_4
Motif
Other DBs
NCBI-ProteinID:
AIL62012
UniProt:
A0A077F9A9
LinkDB
All DBs
Position
complement(3139960..3145194)
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AA seq
1744 aa
AA seq
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MLTSQSIAVPGLHGRFLVDRLPDWLKHATVADLKRWRESLRPAQLNPSGSSAWFFDASED
ARQALLDAQQSSRRSVRALATALKDFQGLGAFAEPLLKAKLKADLDVELDVNTTELVEIH
EESVLLGSMLRIKPRQQSLLQAALQNFAADSEFLSGSALAAKGDFVLELAPGQEGAYPRF
QYRYIRQLDIEPARFAALCHELDLGGKYQTHLGEVFESPSTRDAVRTLSINAYKDNLRLV
AQTALMKGEISAPAQQMFNDLLKGERAPLLHGKPVICQSLSMFQSALDGVLVFSANRVVS
DEVEPIVVYLPGAPLYPLKEYASVAAFKQDLRINLLTSTYLELFRSFVPRHEQEHFFKRL
DEALYDRSLDAGGQLKPEANLHLRDVAIESELFGYVQDQLLKRIKANARDLAVPSAQADE
AAKKQRLAYWESIGFNLLNAAAFFVPVLDAVMAAVAAGQLVKEIVDGAHAWEAGELDEAL
AHFESVALNVVLAVGLGAAGHVAAPLQASERVDSLVRVTLPSGEQRLWKPDLTPYARSVE
LTDIAPNAMGVYRLDGKSYIRIDGQVFEVFEDADGAWSIRHPDDPDAYQPTLKHNQEGTW
QAVGEQPMQWSHETLLSRIGVAADGLPAEVLEQAVRISGVDDDVLRRMHLDQLAVPPLLK
ETLQRFQIDRRVTRLIDSLKEGVPGVHGLGLEPSLSQELPRWPQRVIEVFDEIMPDRAPV
RYGAKRWPSGRVIRISEKELYANKLAEKVLADLNETEALELFGSSVEPDKRLEVLRALIA
DQAIKRRANIFKIMYEHQHPPRSTEQQRLLRDFPMLTDAAAQEIVDAADSAERLQLQASD
GRVPLRLAEEARVYQRQIVLSRAIQGVHKTTLASLDSDRLALGLLTELPGWTNTVRVEMR
EEVLSGRLLASAGEPGGELKVLVRLRGRYTVYDAQGLELSKDQEIIVSLLKALPDSERRA
LNLDIHATQSLRTALYALAVEDRVRAAKLLGQQPIRPWFRSPLRLADGRVGYPLGGSVRN
WALKAKLGAMFPELESAELDEFIRSYQQRNQTLGDVVLRLETEQRVLQTTLAEWVEASEG
PFQRVARARTRGQLVDAWRRLGGRRRSELNLQERDAGHLPVLTARFEHIRSLNMSRMNLQ
QMPTVFLQCFPRLQRLSLESNPLSIIPPDISALVGLRNLNLREVPLNSSDTMFDALRPLV
NLRRLELQSNGLVNIPDAALETLATLPALSHLNLRYNEVSLTSEGLAILARLPLQELDLS
RTGLELDEAGAQVFSRFVRLQRLRLSGNYLRRFPELGNLVQLRDLDLQGCGVSEWPAELT
TLMNQNPYELRIVDLSRNQIIELPDLAATRFGAGLRDNSHAAQGLNLYFNPLDVASIARL
EVIRVGFEPEIVVQVQPEIAVPVQPEDPWLQGADQAQRDLWHDLFQNDGHEALREMLDRL
ASSREFQRNGADVRERVWSMLQLASQHTQLREELLEIAEAFPVTCGDAGADAFSALEIAV
LVFERSQEAITGERSAELLALYKQLFRRHEVQRMADVLSLARKQRRRALRANGALTPLDP
LDDITDVLLRRDEVDDIEIRLALRQQLASELDYPEPSRGMLYQATANLSPQTAQRVKSAV
LARDTVANRQAWMVEDINWTRYLEQRYVSQFDSFREMWAEGQEYLDFCVGVFNEGPEALD
SEVLTFLRTALGAEPMNAEGTLHKIEINDGQYQQASDALKSARKVAEDALVLRLTQATEV
EPEV
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atgctgacttctcaatcgatcgcggtccctggcctgcatggccgctttttagtcgaccgc
ctgccggactggctcaagcatgccacggtcgccgacctcaagcgctggcgcgaaagcctg
cgtccggcccagttgaatccctccggttccagcgcctggttttttgacgcaagcgaagac
gcccgccaggcgttgcttgacgcccagcaaagcagccgccgctcagtgcgggccttggcc
acggcattgaaagattttcagggcctgggcgccttcgctgagcccttgctcaaggccaaa
ctgaaagccgacctggatgtcgaactcgacgtcaacaccaccgagctggtagagattcat
gaagagtctgtactgctgggtagcatgctacggatcaagccacgccagcaaagcctgctc
caggcggcattgcagaattttgccgccgacagcgaatttctgtcgggcagtgccttggcc
gccaagggggattttgtgctggagctggcacctgggcaggaaggtgcttacccgcgcttt
caataccgctatatccgtcagctggacatcgaacccgcgcgctttgccgccttgtgtcat
gagctggatctgggcggcaagtatcagacgcacttgggcgaagtgttcgagagtccttcg
actcgggatgccgttcgtacgttgtcgatcaacgcctacaaggacaatttgcgccttgtt
gcgcaaacagcactgatgaagggcgaaatctctgccccggctcagcagatgttcaacgac
ttgctcaaaggcgagcgagccccgcttctgcatggcaagcctgtcatctgccaatcactg
agcatgttccagtcagcgcttgacggcgtactggtgttcagtgccaatcgggttgtcagc
gacgaggtcgagccgattgtcgtctacttgccaggtgcaccgctgtacccgctcaaagag
tacgcttcagtggcggcgttcaagcaagacctgcgcataaacctgctgacgtctacttac
ctggagctgtttcgatctttcgtgcccaggcatgagcaagaacatttcttcaagcggctt
gatgaggcgctgtatgaccgcagccttgatgccggtggccaactcaaacccgaggccaat
ctgcacctgcgtgatgtggcgattgaaagtgagttgtttggctatgtacaagaccagctg
ctcaaacgaatcaaggccaatgcccgcgaccttgccgtacccagtgcgcaggcggatgaa
gcggcgaagaagcaacgcctggcttactgggaaagcattggtttcaatctgctcaacgcc
gctgcgttctttgtgcctgtgctcgatgcagtaatggcggcggtcgccgctgggcaactg
gtcaaagaaattgtcgacggggctcatgcctgggaggctggtgagctggatgaggcgttg
gcgcattttgagtcggtggctctgaatgtcgtcctggctgtcggtttgggtgccgcaggc
catgttgccgcaccgttgcaggcaagcgagcgtgtggacagcctggtgcgtgtcaccttg
cccagcggcgagcagcgcttgtggaagcctgacctgacaccctatgcccgcagtgtcgaa
ctgacagacatcgccccgaatgctatgggggtgtaccgccttgatggcaaatcctacatc
cgcatcgacggccaggtcttcgaagtgttcgaagacgctgacggtgcctggtcgatccgc
cacccggatgacccggatgcctatcagccgaccctcaagcataaccaggagggcacctgg
caagcagtcggtgagcaaccgatgcagtggagccatgaaacgttgctcagccgcattggc
gttgcagcagatggactacctgctgaggtgcttgagcaggccgtgcgcatcagtggcgtt
gacgacgacgttctgcgacgcatgcatctggatcagctagcggtgccgccattgctcaaa
gaaacactgcagcgttttcagattgaccgccgggtgacccgcttgatcgacagcttgaaa
gaaggtgtacccggtgtgcacggcttgggcctggagccaagcctgagccaggaattgcct
cgctggccgcaacgggtcatcgaagtctttgacgagatcatgccggaccgagcgcctgtt
cgctatggtgccaagcgctggcccagcgggcgggtgattcgcatatcggaaaaggagctg
tatgccaacaagctggctgaaaaagtgttggcggatttgaacgagaccgaagcgctcgag
ctgtttgggtccagtgtcgagccagataagcgactggaggttttgcgtgccctgattgca
gatcaggcgataaaacgccgcgccaatattttcaagatcatgtacgagcatcaacatccg
cctcgctcgactgaacagcaacgcctgctgcgcgactttccaatgctgaccgacgccgct
gcacaggagatagtggacgctgcggactctgcagagcgtctgcaattgcaagccagtgat
ggccgggtgccgttacgtttggccgaagaggctcgggtgtatcaacgtcagattgtcttg
agtcgggcaatacagggcgtgcataaaaccaccctggcaagtctggacagcgaccgcctg
gccttggggctgttgactgaactgcctggctggactaacacggttcgtgtggaaatgcgc
gaggaggtgttgtccggtcgcttgctggccagcgccggcgaacctggcggcgaactgaag
gtgctggtgcgcctgagagggcgctataccgtctatgacgctcaggggcttgagctgagc
aaggatcaggagattatcgtctctctgctcaaagccctgcccgatagcgagcgaagggcg
ttgaacctcgatatccatgccacacaatccttgcgtaccgccctgtatgcgcttgctgtt
gaggatcgtgtgagggcggcgaaactgctcggccagcagcccatcagaccgtggtttcgc
tcacccttgcgcctggccgatggccgtgttgggtaccccctgggcggatcagtgcgaaat
tgggccctcaaggcaaagctcggggcaatgttcccggagctggagagcgcggagcttgac
gagttcattcggtcctatcagcagcgcaatcagacgttgggggatgttgttctcaggcta
gagaccgaacaaagagtgctccagacaacccttgctgagtgggtcgaggccagtgaaggc
ccctttcagcgcgttgctcgcgcaagaaccagggggcaattggtggacgcctggcgtcga
ctaggtggtcgccgaagatcggagttgaatctgcaagagcgggatgctgggcatcttcct
gtattgacggcgcgcttcgagcatatccgaagcttgaacatgagccgaatgaacctgcag
caaatgcccacagtgttcctgcagtgctttccaaggctgcaacgcctgtcgttggaaagt
aacccgttgagcattattccgcctgatatcagcgcattggttggcctgcgcaatttgaat
ttgagagaagtccccctgaacagcagcgatacaatgtttgatgcgttgaggccattggta
aacctgcggcggctggagttgcaaagtaacggactggtcaacatcccggatgcagccctg
gaaacgctggccacattgcctgcattgagccatctgaacttgcgctacaacgaggtgagt
ttgactagcgaaggcttggcaatcctggctcgtttacccctgcaggagctggacttgagc
aggactgggctggagctggatgaagcaggcgcccaggtcttctcaaggtttgtccgcctg
cagcgtttgaggttaagcggcaactacttgaggcggtttcccgagcttggcaaccttgtg
cagctgcgggatttggatcttcaggggtgcggggtaagtgaatggcccgccgagttgacc
acgctgatgaaccagaatccctatgagctgcgaatagtcgacctcagtcgcaaccagatc
attgagttgccggacctggctgccacgcgttttggcgctggtctgcgcgataattcacat
gctgcgcaggggctgaatctgtacttcaacccgctggacgtcgcgagcatcgcccgcctg
gaagtaatcagggtagggttcgagcctgaaatcgtcgtacaagtacagcctgaaattgcc
gtacccgtacaacctgaagatccctggctgcagggcgcagatcaggcgcaacgcgacctg
tggcatgacctgttccagaatgacgggcacgaggcgctgcgtgaaatgcttgaccggctg
gcctcgtcccgggagtttcaacgcaatggggcggatgtgcgcgagcgggtgtggtcaatg
ctccagcttgcctcgcagcacacgcagctaagagaggaactgctcgaaattgccgaagct
tttccggtcacttgtggcgatgccggtgccgatgctttcagcgccctggaaattgcggtg
ctggtgtttgaacgaagccaggaagccatcaccggtgagcgcagtgccgaattgctggct
ttgtacaaacagttgttccgtcgccatgaagtccagcgtatggccgatgtactgtcattg
gcccgcaagcagcggcgtcgagccttgagggcgaacggtgcgctgaccccgctggatccg
ctggatgacatcactgatgtcctgttgaggcgtgacgaagtcgatgacatcgaaattcga
ctggccttgcgccagcagctggcgagtgagctggattatccggagccttccaggggcatg
ctttatcaagccactgccaatctgtcgccgcagacggcacagcgggttaaaagtgcagtc
ttggcgcgtgatacggtcgccaaccggcaagcatggatggtcgaggatatcaattggacg
cgttacctggagcagcgttacgtgtcgcaattcgatagtttccgggagatgtgggctgag
gggcaggagtacctggacttctgcgttggtgtgttcaacgagggacctgaagcgctcgat
agtgaggtgttgacgttcctgcgcactgcgttgggcgcagaacccatgaacgcagagggt
acgttgcacaagattgaaatcaacgatgggcagtatcagcaggcgagcgatgccctgaaa
agcgccaggaaagttgctgaggacgcgctggtactgaggttgacacaggctacagaggtt
gaacctgaggtgtga
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