KEGG   Pseudomonas alcaliphila: UYA_06670
Entry
UYA_06670         CDS       T06680                                 
Name
(GenBank) conjugative coupling factor TraD, PFGI-1 class
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
pall  Pseudomonas alcaliphila
Brite
KEGG Orthology (KO) [BR:pall00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pall02044]
    UYA_06670
Secretion system [BR:pall02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   UYA_06670
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87 Clostridium_P47
Other DBs
NCBI-ProteinID: APU29426
UniProt: A0A1L7FX65
LinkDB
Position
1471668..1473824
AA seq 718 aa
MAQPHAVEVLLRPAVELYTVAVCTGAAILCLVAPWSLALNPLLGLGSALAFLSFGAIRLR
DAWAILRYRRNIRRLPRYVMTSRDVPVSQQRLFVGRGFRWEQRHTHRLLQTYRPEFRRYV
EPTAIHRAARGLEERLEFAPFPLSKLARALAWDSPLNPARPLPPVGGLPRLHGIEPAEVD
VTLPLGERVGHTLVLGTTRVGKTRLAELFITQDIRRKVRGEHEVVIVFDPKGDADLLKRM
YIEARRAGREGEFYVFHLGWPDISARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREFA
WRFVNIIARALVELGQRPDYLLIQRHVINIDALFIEYAQHYFARNEPKAWEVIVQLEARL
NDKNIPRNMIGREKRVVALEQYLSQVRVYDPVLDGLRSAVRYDRTYFDKIVASLLPLLEK
LTTGKIAQLLAPNYSDLSDPRPIFDWMQIIRKRAVVYVGLDALSDAEVAAAVGNSMFSDL
VSVAGHIYKFGIDDGLPGAAVGTRIPINVHADEFNELMGDEFIPMVNKGGGAGVQVTAYT
QTLSDIEARIGNRAKAGQVVGNFNNLFMLRVRETATAELLTRQLPKVEVYATALMSGATD
SSDPRGNTAFTSNTQDRISSNSVPLIEPAHVVALPKGQCFALTEGSNLWKVRMPLPAPDS
DEAMPKDLQELAGYMRQHYVEAGDWWENQGIPGLQDEALPDDLLDDFKQMAAADGTEA
NT seq 2157 nt   +upstreamnt  +downstreamnt
atggcccaaccgcatgcggtcgaggttctgctgcggccagcggtggagctttataccgtg
gcggtctgcaccggtgccgcgattctgtgcctagtggcaccatggtcgctcgcgctgaac
ccgctgctcggtctgggctcggcgctggccttcctgagcttcggcgcgattcgcctgcgc
gatgcctgggcgatcctgcgctatcgccgcaacatccgccgcctgccgcgctacgtgatg
accagccgcgacgtgccggtcagccagcaacggctgttcgtcggccggggctttcgctgg
gagcagcggcacacgcaccggctgctgcagacctaccggccggagttccgccgctacgtc
gagccgacggcgatccatcgggccgcccgggggctggaggagcggctggagttcgcgccg
tttcccctctcgaagctggcgcgcgcgctggcctgggacagcccgctcaacccggcgcgg
ccgctgccgccggtgggcggactgccgcgcctgcacggcatcgaaccggccgaggtcgac
gtcacgctgccgctgggcgagcgcgtcggccacaccctggtgctgggtaccacgcgcgtg
ggcaagacgcggctggccgagctgttcatcacccaggacatccgccgcaaggtccgtggc
gagcacgaggtggtgatcgtcttcgaccccaagggcgatgcggacctgttgaagcgcatg
tacatcgaggccaggcgcgccgggcgtgaaggcgagttctacgtcttccatttgggctgg
ccggacatctcggcgcgctacaacgccgtcggccggttcgggcggatctccgaggtggcc
acgcgcatcgccggacagctctcgggcgaaggcaacagcgccgcgttccgcgaattcgcc
tggcgcttcgtcaacatcatcgcgcgcgccctggtcgagctggggcagcggccggactac
ctgctgatccagcgccacgtcatcaacatcgacgcgctgttcatcgagtacgcccagcac
tacttcgccaggaacgaaccgaaggcctgggaggtcatcgtccagctcgaagccaggctc
aacgacaagaacatcccgcgcaacatgatcgggcgcgagaagcgcgtggtggccctcgaa
cagtacctgtcccaggtgcgcgtctatgacccggtgctcgatggcctgcgcagcgccgtg
cgctacgaccggacctacttcgacaagatcgtcgcttcgctgctgccgctgctggagaag
ctgaccaccggcaagatcgcgcaactgctcgcaccgaactattccgacctgtccgacccg
cggccgatcttcgactggatgcaaatcatccgcaaacgcgcggtggtctatgtggggctg
gatgcgctgtccgacgccgaagtcgcggcggcggtgggcaactcgatgttcagcgatctg
gtctcggtcgccggccacatctacaagttcggcatcgacgacgggctacccggcgccgcg
gtgggcaccaggattccgatcaacgtccacgccgacgagttcaacgaactgatgggcgac
gagttcatcccgatggtcaacaagggcggcggggcgggcgtgcaggtgacggcctacacg
cagacgctcagcgacatcgaggcgcgcatcggcaaccgcgccaaggcaggacaggtggtc
ggcaacttcaacaacctgttcatgctgcgcgtgcgcgagaccgccaccgccgagctgctg
acgcgacaactgcccaaggtcgaggtgtacgccacggcactgatgagcggcgccaccgac
agctccgacccgcgcggcaacaccgcgttcacgtccaacacccaggaccgcatcagcagc
aacagcgtgccgctgatcgaaccggcgcatgtggtggcgctgcccaaggggcagtgcttc
gcgctgaccgagggcagcaacctctggaaagtccgcatgccgctgccggcacccgattcc
gacgaagccatgccgaaggatctgcaggagctggccggctacatgcgccagcactacgtc
gaggcgggagactggtgggagaaccagggcatccccggcctgcaggacgaggcgctgccc
gacgacctgctggacgacttcaagcagatggccgcggctgacggaacggaagcatga

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