Paracoccus alcaliphilus: JHW40_01745
Help
Entry
JHW40_01745 CDS
T08960
Name
(GenBank) PAAR/RHS domain-containing protein
Organism
palp
Paracoccus alcaliphilus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
PAAR_motif
RHS
Motif
Other DBs
NCBI-ProteinID:
WCR18513
LinkDB
All DBs
Position
318325..323070
Genome browser
AA seq
1581 aa
AA seq
DB search
MSLLEYSMRVAGQNSTHLMGFGSEGSAPPASGSTPQMQQAIADQPGARNALEQGWDSTLD
FMESPGVQYSVMGTAAVAAMVKGGLGIAGCAAAAGSTATAGAITLGAVGGLIPIAAGVAA
GFAGHWVGTHIGDFIGGQMGLEPLSGPSEKPACVGDKIYHAPSGLVAGLMGAAVVLGAVA
AIGAAAVLTAATGGAAAPLLVATVAFVAGGLVGGACMGAASSLGNQGEEKGEIRTGSPDV
FFESKPVAHVSCFIDCDDHGMEKQCAQGSDTVYVNGFPLSRQGHKTTCDGTIQTGRDTIM
LDVTTSADMLDIDGGWLNRLTRTAVVISDFLPFPRGRKPSQGDRTPPAPRTPDGPAKPPR
FPRVNAAANALNNAFLRMEGDPVDVASGQVAEFRTDLTIPGTIDLRLDRSYRRGATGIQG
RDWSGTWAQHLRLEPGAVVWQDPDGVQFTFETPEDNVWSVNLRCPHIALMGSRSGRLYLY
DHRSQLFTIFGHRVGKHLLLTEIQDRNGNEITFHWGPEGLTSVHHSDGFGLIVDSRGMLI
RHATLLGHDAGDCVFTWQYDAGGRLQRVDSAQTGQLNYGYDPQGRLAMWSDSHLTRAHFA
YDDHDRVIRNWTDSGHLSVELAYDLSARRTRVTDAAGAVKLFDWTERGLVWREIDAAGGE
WLTEWGTGAEVLTRQDPLGNIWRYDHDGVGNLIRATDPEGNSESWEYGPDRLPVAHVDAN
GARTTFRHDQSGNLIAVTDPTGAQRLFRRDEQGKILRIDQPQDRQMRIYYDRLNRPARVQ
APSGQSIRLTHDTEGRMVSQIDEIGAETVMDYTRSARNPRGALASVTLPDGTVINASYDS
EGLLSAASNGEGDMRSFRHGAFDLPLETQDPQGHRVRLEHDFALRVTAVVNEMGQRHELS
YDAVGNLVAERDYSGLITRYEHDAAGRLALRIAPDGARTRYEWSPAGRLLGTEVTDGDRV
LTTHSTYDPAGRLVGIEDDNSRITRRFDAAGRLVSETVNGRETSFDYRPGESTPVARGGD
GLGIEIDHAIDGHVSAMRFAGTELRFKHDMRGLETLRHSSGGFSQEQGWDVMRRLTGQLA
GPGLMQGRPGAARIERGYRWDRAGRVVAISDRAAGLTQMRYDARGLVTDTSQQRPDGSTP
LLRRFDYDPSRNLAGLIEDMRAEQVEKHAGRIRRRGRITYQHDDCGRVIQKRHEEPGFRP
RIWAMAWDAQDRLVRLTAPDGSVWRYDYDALGRRIRRLRVIDGGKPERDPDDWSLPAPPP
SGEATRAGGSSRMGSAYQWDGDRIVAEAPVYADGTVAWDQAEHWVYDPDSFRPLARVHQG
HVAHVVTDHLGTPRELVSDDGTRVLWRAELGLWGGIDRIEQAANDDHPPVDCPIRFQGQW
ADPESGLHYNRHRYYDPDATQYLTPDPIGLLGGIRPQGYVDDPNGWVDPLGLARCTVNDC
PAGGRGNIGGITVGPYSTIGGHHLNQGAAYRSQIPYRDGLTADIPGNIFTQPNSPHYRAH
QSLEAFWDLYRKGGPFEGQVPTNAQYDQALRQSLLAAGYPPLQAHRLADAAAAERKAHGL
SKHDKVPKVPGPISSVRNPRR
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgcttgaatattccatgcgcgtcgcgggtcagaactcgacccatctgatgggt
ttcgggtccgaaggcagcgcgccccccgcctcgggctcgaccccgcagatgcaacaggcc
atcgcggatcagccgggcgcgcgcaacgcgctggagcagggctgggattccacgctggat
ttcatggaaagtcccggcgtgcagtattccgtgatgggcaccgccgccgtcgccgcgatg
gtcaagggcgggctgggtatcgcgggctgcgcggcggcggcgggctcgaccgccaccgca
ggggcgatcacccttggcgcggtgggcgggctgatcccgattgcggcaggggtcgcggcg
ggctttgcggggcactgggtgggcacccatatcggcgatttcatcggtggccagatgggg
ctggagccgctgtccggccccagcgagaaaccggcctgcgtcggcgacaagatctatcac
gcgccctccggtctggtcgcgggactgatgggggccgccgtcgtgctgggcgcggttgcg
gccatcggcgcggcggcggtcctgacggcggccaccggcggcgcggcggcaccgcttctg
gtggccacggtcgccttcgtcgcgggcggtctggtcggcggcgcctgcatgggcgcggcc
agcagcctaggcaatcagggcgaggaaaagggcgaaatccgcaccggatcgcccgatgtg
ttcttcgagtccaaacccgtggcgcatgtcagctgctttatcgactgcgacgatcacggg
atggaaaagcaatgcgcccaaggctcggacacggtttatgtgaacggctttccgctgtcg
cgtcagggccacaagaccacctgcgacggcaccatccagaccggccgcgatacgatcatg
ctggatgtgaccacctcggccgatatgctggatatcgacggcggctggctgaaccggctg
acgcgcacggcggtggtgatctcggatttcctgccattcccgcgcggtcgcaagccgtcg
cagggcgacaggaccccgcccgccccgcgcacgcccgacggcccggcgaaaccgccgcgc
tttccgcgtgtgaacgccgccgccaatgcgctgaacaacgcctttctgcggatggagggc
gatcccgtcgatgtcgcctcgggtcaggtggccgagttccgcaccgacctcaccattccc
ggcaccatcgacctgcggcttgaccgcagctatcgccggggggcaaccggcattcagggt
cgcgactggtccggcacatgggcgcagcatctgcggctggagccgggcgcggtcgtctgg
caggacccggacggcgtgcagttcaccttcgagacgcccgaggacaatgtctggtccgtc
aacctgcgctgcccgcatatcgcgctgatgggatcgcgttcggggcggttgtatctctat
gaccatcgcagccagttgttcaccatcttcggtcaccgggtcggcaagcacctgctgctg
accgagatacaggaccgcaacggcaacgagatcactttccactggggacccgagggcctg
acttcggtccatcacagcgacggtttcgggctgatcgtggacagccgcggcatgctgatc
cgccatgccacgctgttgggccatgacgcaggagattgtgtctttacttggcagtatgac
gcgggcgggcggttgcagcgggtcgattccgcgcaaaccgggcagttgaattacggctat
gacccgcaggggcggctggccatgtggtccgacagccacctgacgcgggcgcatttcgcc
tatgacgaccacgaccgggtgatccgcaactggaccgacagcggccatctgtcggtcgag
ctggcctatgacctgtccgcccgccgcacccgcgtcaccgatgccgccggggcggtcaag
ctgttcgactggaccgagcgcgggttggtctggcgggagatcgacgccgccgggggcgaa
tggctgaccgaatggggcaccggggccgaagtcctgacgcggcaggatccgctggggaac
atctggcgctatgaccatgacggggtgggcaacctgatccgcgccactgaccccgagggc
aacagcgaaagctgggaatacggtcccgaccggctgcccgtggcccatgtcgatgccaat
ggcgcccgcaccaccttccgccacgaccagagcggcaacctgatcgccgtgaccgatccc
accggcgcgcaaaggctgttccgccgcgacgaacagggcaagatcctgcggatcgaccag
ccgcaggatcggcagatgcggatctattacgaccggctgaaccgacccgcgcgggtgcag
gcgccctcgggacagtcgatccgcctgacccatgacaccgagggccggatggtcagccag
atcgacgagatcggtgccgagacggtgatggattatacccgcagcgcgcgcaatccgcgc
ggcgcgctggccagcgtgaccctgcccgatggcaccgtgatcaatgcaagctatgacagc
gaaggtctgctgagcgccgccagcaatggcgaaggcgacatgcgcagcttccgtcatggc
gccttcgatctgccgctggagacgcaggacccgcaaggccatcgcgtccggctggaacat
gacttcgccctgcgcgtcaccgccgtcgtgaacgagatggggcagcgtcacgaactcagc
tatgacgccgtgggcaatctggtggccgagcgcgattattccggcctcatcacccgctat
gaacatgatgcggcggggcggctggcgctgcgcatcgccccggatggcgcgcgcacccgc
tatgaatggtcgcctgcgggccggttgctggggaccgaggtgacggatggcgaccgggtg
ctgaccacgcactcgacctatgatccggcaggccgtctggtcgggatcgaggacgacaac
agccggatcacccgccgctttgatgccgcgggccgtctggtcagcgaaaccgtcaatggc
cgcgagaccagctttgactatcgcccgggcgaatccacccccgtcgcgcggggcggcgac
gggctggggatcgagatcgaccatgccatcgacggccatgtctcggcgatgcgctttgcc
gggaccgagctgcgcttcaagcatgacatgcgcgggctggagacgctgcgccacagctcg
ggcgggttcagccaggagcagggctgggacgtcatgcgccgcctgaccgggcaactggca
ggccccggcctgatgcagggccgccccggcgcggcgcggatcgaacgcggctatcgctgg
gaccgcgccggccgggtcgtggcgatcagcgaccgcgcggctggcctgacccagatgcgc
tatgacgcgcgcgggctggtcaccgataccagccagcagcgcccggacggttcgaccccg
ctgttgcgtcgcttcgactatgaccccagccgcaaccttgccggtctgatcgaggatatg
cgcgccgagcaggtcgagaaacacgcaggtcgcatccgccgccgtggccgcatcacctat
cagcatgacgattgcggccgggtgatccagaagcggcacgaggaaccgggcttccgcccg
cgcatctgggcgatggcctgggatgcgcaggaccgtctggtgcggctgacggcgccggac
ggctcggtctggcgctatgactatgacgcgcttggccgccgcatccgacgcttgcgggtg
atcgatggcggcaagcccgaacgcgatcccgacgactggagcctgcccgcccccccgcca
tccggcgaagcaacgcgcgcaggcgggtcatcgcggatgggcagcgcctatcaatgggac
ggcgaccgcatcgtggccgaggcaccggtctatgccgatggcaccgtcgcgtgggatcag
gccgagcattgggtctatgatcccgacagtttccgcccgctggcccgcgtccatcagggc
catgtcgcccatgtcgtgaccgaccatctgggcaccccgcgagagctggtttcagacgat
ggcacccgcgtcctgtggcgcgccgaactgggcctgtggggcggtatcgaccggatcgag
caagccgccaatgacgaccacccgccggtcgattgtccgatccgctttcaagggcaatgg
gccgatcccgaaagcggcctgcattacaaccgccaccgctattacgaccccgacgcgacc
caatacctgacccccgacccgatcggattactgggcggcatcagaccgcagggctatgtc
gatgatccgaacggctgggtcgatccgctggggctggcgcggtgtaccgtcaatgattgc
cctgccggtggtcgaggtaacatcgggggaataactgttggcccttacagcacgataggt
ggccaccacctgaatcagggtgcggcctatcgttcccaaataccttatcgggatgggcta
acggcagatattccgggcaatatcttcactcagccgaattcgccccactacagggcacat
caaagtctcgaagcattttgggacctctatcggaaaggtgggccgttcgaaggtcaggtt
ccaacaaacgcgcaatacgatcaggcgctgaggcagtccctgctggctgccggctaccct
ccgctgcaggcacacagacttgccgacgcagctgccgccgaaagaaaggctcatggactg
tcgaagcacgacaaggtaccgaaagtccccggaccgatttcaagcgtgcgtaatcccagg
aggtag
DBGET
integrated database retrieval system
