Pseudooceanicola algae: PSAL_033240
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Entry
PSAL_033240 CDS
T06943
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
palw
Pseudooceanicola algae
Pathway
palw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
palw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSAL_033240 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palw03400
]
PSAL_033240 (uvrB)
DNA repair and recombination proteins [BR:
palw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSAL_033240 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSAL_033240 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
DUF87
AAA_22
eIF3_p135
AAA_5
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QPM92061
UniProt:
A0A418SHW2
LinkDB
All DBs
Position
3543271..3545469
Genome browser
AA seq
732 aa
AA seq
DB search
MPYAHSDKQPPLMHAPAPDVRTREKLEGGQRLVMQTEFTAAGDQPTAIAELTQGVLDGER
DQVLLGATGTGKTFTMAKIIERTQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSFY
DYYQPEAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVET
YGAMTQDLKVGGIFDQRQVIADLVAQQYKRNDHAFQRGSFRVRGDSLEIFPAHLEDRAWR
LSFFGEELEAITEFDPLTGEKTNAFQQIRVYANSHYVTPKPTMQQAIISIKKELKQRLDQ
LVGEGKLLEAQRLEQRTNFDIEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNA
IVFADESHVSVPQIGGMYKGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVS
ATPSKWELEQAGGVFTEQVIRPTGLLDPVIEIRPVGMQVDDLLDEVRKVTAEGYRTLVTT
LTKRMAEDLTEYMHEQGIKVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIP
ECGLVAILDADKEGFLRSETSLVQTIGRAARNVDGRVIMYADKITGSMERALAETDRRRE
KQIAYNVEHNITPATVKKNVDDILAGLYKGDVDMNRVTAQVEKPLVGANLQAHLDGLRVE
MRKAAENLEFEEAARLRDEVKRLEAVELAVGADPMARQSAIEAASEKSQSTRGRSTAGRP
GQHGGNVKRRKR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgccctacgcccattccgacaagcaaccgccgctgatgcatgctccggccccggatgtg
cgcacccgtgaaaagctggaaggcggacagcggcttgtcatgcagaccgaattcaccgcc
gccggcgaccagccgacggccatcgccgaactgacccaaggggtgctggacggcgaacgc
gatcaggtcctgctgggggcgaccggcaccggcaagacctttaccatggccaagatcatc
gaacggacgcagcgcccggcgatcatccttgccccgaacaagacgctggctgcgcagcta
tacggcgaattcaagggcttcttccccgataacgcggtggaatatttcgtcagcttctat
gactactaccagcccgaggcctatgtcgcgcgcagcgacacctatatcgagaaggaaagc
cagatcaacgagcagatcgaccgcatgcgccactcggccacgcgggcgcttctggaacgc
gatgacgtgatcatcgtcgcctcggtgtcctgcatctacgggatcgggtcggtcgaaacc
tacggcgcgatgactcaggatctgaaggtcggcggcatcttcgatcagcgccaggtcatc
gccgacctcgtggcccagcagtacaagcgcaatgaccatgccttccagcggggcagcttc
cgggtgcggggcgacagccttgaaatcttcccggcgcaccttgaggatcgggcctggcgg
ctgtctttcttcggtgaggaactggaggcgatcacggaattcgatccgctgaccggcgaa
aagaccaatgccttccagcagatccgggtctacgccaacagtcactacgtgacgccaaaa
ccgacgatgcagcaggcgatcatcagcatcaagaaagagctcaagcagcgccttgatcag
ctggtgggcgagggcaagctgctggaagcgcagcggcttgaacagcgcaccaatttcgac
atcgagatgctggaagccaccggtgtctgcaacgggatcgagaattattcgcgctacctg
acgggccgcgcgccgggcgaaccgccccccacgctgttcgagttcatccccgataacgcc
atcgtctttgccgatgaaagccacgtcagcgtgccccagatcggcgggatgtacaaaggc
gactaccggcgcaagttcacccttgccgagcacggtttccgcctgccgtcctgcatggac
aaccgccccctcaagtttgaggaatgggatgccatgcgcccgcaatcggtctttgtctcg
gccacccccagcaagtgggagctggagcaggcgggcggcgtcttcaccgaacaggtgatc
cgccccaccggcctgctggatcccgtgatcgagatccggcccgtcggcatgcaggtcgac
gacctgctggacgaggtccgcaaggtgacagcggagggctaccgcacgctggtgaccacc
ctgaccaaacgcatggccgaggatctgaccgaatacatgcatgaacagggcatcaaggtg
cgctacatgcattcggatatcgacacgatcgagcggatcgagatcctgcgtgacctgcgc
cttggcgccttcgacgtgctgatcgggatcaacctgctgcgcgagggcctcgacatcccg
gaatgcgggctggtggccattctggacgcggacaaggaaggcttccttcggtcggaaacc
tcgctggtgcagactatcgggcgggcggcgcggaacgtcgacggccgggtcatcatgtat
gccgacaagatcaccggcagcatggagcgcgcgctggccgaaaccgaccgccgtcgcgag
aagcagatcgcctacaacgtcgaacacaacatcacgccggccacggtgaagaagaatgtc
gatgatatcctggccgggctctacaagggcgacgtggatatgaaccgggtcacggcgcag
gtcgaaaagccgctggtcggggccaatctgcaagcccacctcgacgggctgcgcgtcgag
atgcgcaaggccgccgagaacctggaattcgaagaggccgcgcgactgcgcgacgaggtc
aagcgtctggaggcggtcgaactggctgtcggtgccgatcccatggcacgccaatccgca
atcgaggctgcgtctgaaaaatcgcagagcacgcggggccgctcgaccgccgggcgtccg
ggccagcatggcggaaacgtgaaacgccgcaaacgctag
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