Populus alba (white poplar): 118029473
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Entry
118029473 CDS
T07314
Name
(RefSeq) histone deacetylase 9
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03082
ATP-dependent chromatin remodeling
palz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118029473
03083 Polycomb repressive complex
118029473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palz03036
]
118029473
Enzymes [BR:
palz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
118029473
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
118029473
HDAC complexes
Sin3A-HDAC complex
118029473
BRAF-HDAC complex
118029473
REST complex
118029473
SHIP complex
118029473
MiDAC complex
118029473
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
118029473
Heterochromatin formation proteins
Other heterochromatin formation proteins
118029473
Chromatin remodeling factors
NuRD complex
118029473
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
118029473
NCBI-ProteinID:
XP_034889268
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MRSKDRIAYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSEDYVEFLHRITPDTQHLFAGELARYNLGEDCPVFENLFEFCQIYAGGTIDAAHRL
NNQLCDIAINWAGGLHHAKKCGASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDMFFPGTGDVKELGEREGKFYAINVPLKDGIDDTSFTRLFKT
IISKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPENEYIKYFAPDYSLKSPGGLMENLNSKSYLSTIK
MQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERMDQHTQDKQIQRDDEYYEGD
NDNDHADGS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccaaagacagaattgcctatttctatgatggtgatgtgggtagtgtttatttt
ggaccaaaccatccaatgaagccacacagactttgtatgacacaccatcttgttctctct
tatgagctacacaagaagatggaaatttatagaccacacaaggcatatcctgttgagctt
gctcagtttcattccgaggattatgttgaatttttgcatcggattacgccggatactcag
cacttgttcgcgggggaattggctagatataaccttggagaagattgccctgtcttcgaa
aacttgtttgaattttgtcagatttatgctggtggaactatagatgctgcacataggttg
aacaatcaactgtgtgacattgctataaattgggccggtggattacatcatgcaaaaaag
tgcggggcatctggtttttgttacatcaatgacctggttttggggattttggagcttctg
aaacaccatgctcgtgttctgtacattgatatagatgttcatcatggtgatggtgttgaa
gaagccttttatttcactgacagggtgatgactgtgagttttcacaagtatggagatatg
ttctttcctggaactggtgatgttaaggaactaggagaaagagaaggaaaattttatgct
ataaatgttccactgaaagatggaatcgatgacactagcttcactcgactatttaaaaca
atcatttccaaggttgtagaaacttatcagccaggtgcaatagttcttcaatgcggagca
gattcgttggctggggaccgcttgggctgcttcaatctttccattgatgggcatgcagaa
tgtgttaggtttgtgaagaaattcaacttgcccttgttggttacaggaggtgggggatac
acaaaagagaatgttgctcgatgttggaccgttgaaacaggagttcttttagacacagaa
ctgcccaatgagattccagaaaatgagtatattaaatattttgcccctgattattcattg
aaaagtcctggtggactcatggagaacttaaatagcaaatcttatcttagcacaatcaaa
atgcaagtactagaaaatctccgttgcatccaacatgctccaagtgtacagatgcaagag
gtacctcctgacttctacattcccgattttgatgaagatgagcaaaaccctgatgagcgc
atggatcagcatacccaggacaagcaaatccaacgcgacgatgaatattatgaaggcgac
aatgataacgaccacgcggatggctcatga
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integrated database retrieval system