KEGG   Populus alba (white poplar): 118029473
Entry
118029473         CDS       T07314                                 
Name
(RefSeq) histone deacetylase 9
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
palz  Populus alba (white poplar)
Pathway
palz03082  ATP-dependent chromatin remodeling
palz03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    118029473
   03083 Polycomb repressive complex
    118029473
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:palz03036]
    118029473
Enzymes [BR:palz01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     118029473
Chromosome and associated proteins [BR:palz03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     118029473
   HDAC complexes
    Sin3A-HDAC complex
     118029473
    BRAF-HDAC complex
     118029473
    REST complex
     118029473
    SHIP complex
     118029473
    MiDAC complex
     118029473
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     118029473
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    118029473
  Chromatin remodeling factors
   NuRD complex
    118029473
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 118029473
NCBI-ProteinID: XP_034889268
LinkDB
Position
Unknown
AA seq 429 aa
MRSKDRIAYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSEDYVEFLHRITPDTQHLFAGELARYNLGEDCPVFENLFEFCQIYAGGTIDAAHRL
NNQLCDIAINWAGGLHHAKKCGASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDMFFPGTGDVKELGEREGKFYAINVPLKDGIDDTSFTRLFKT
IISKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPENEYIKYFAPDYSLKSPGGLMENLNSKSYLSTIK
MQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERMDQHTQDKQIQRDDEYYEGD
NDNDHADGS
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgcgctccaaagacagaattgcctatttctatgatggtgatgtgggtagtgtttatttt
ggaccaaaccatccaatgaagccacacagactttgtatgacacaccatcttgttctctct
tatgagctacacaagaagatggaaatttatagaccacacaaggcatatcctgttgagctt
gctcagtttcattccgaggattatgttgaatttttgcatcggattacgccggatactcag
cacttgttcgcgggggaattggctagatataaccttggagaagattgccctgtcttcgaa
aacttgtttgaattttgtcagatttatgctggtggaactatagatgctgcacataggttg
aacaatcaactgtgtgacattgctataaattgggccggtggattacatcatgcaaaaaag
tgcggggcatctggtttttgttacatcaatgacctggttttggggattttggagcttctg
aaacaccatgctcgtgttctgtacattgatatagatgttcatcatggtgatggtgttgaa
gaagccttttatttcactgacagggtgatgactgtgagttttcacaagtatggagatatg
ttctttcctggaactggtgatgttaaggaactaggagaaagagaaggaaaattttatgct
ataaatgttccactgaaagatggaatcgatgacactagcttcactcgactatttaaaaca
atcatttccaaggttgtagaaacttatcagccaggtgcaatagttcttcaatgcggagca
gattcgttggctggggaccgcttgggctgcttcaatctttccattgatgggcatgcagaa
tgtgttaggtttgtgaagaaattcaacttgcccttgttggttacaggaggtgggggatac
acaaaagagaatgttgctcgatgttggaccgttgaaacaggagttcttttagacacagaa
ctgcccaatgagattccagaaaatgagtatattaaatattttgcccctgattattcattg
aaaagtcctggtggactcatggagaacttaaatagcaaatcttatcttagcacaatcaaa
atgcaagtactagaaaatctccgttgcatccaacatgctccaagtgtacagatgcaagag
gtacctcctgacttctacattcccgattttgatgaagatgagcaaaaccctgatgagcgc
atggatcagcatacccaggacaagcaaatccaacgcgacgatgaatattatgaaggcgac
aatgataacgaccacgcggatggctcatga

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