Populus alba (white poplar): 118032313
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Entry
118032313 CDS
T07314
Name
(RefSeq) histone deacetylase 19
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03082
ATP-dependent chromatin remodeling
palz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118032313
03083 Polycomb repressive complex
118032313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palz03036
]
118032313
Enzymes [BR:
palz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
118032313
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
118032313
HDAC complexes
Sin3A-HDAC complex
118032313
BRAF-HDAC complex
118032313
REST complex
118032313
SHIP complex
118032313
MiDAC complex
118032313
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
118032313
Heterochromatin formation proteins
Other heterochromatin formation proteins
118032313
Chromatin remodeling factors
NuRD complex
118032313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
118032313
NCBI-ProteinID:
XP_034892881
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MDTGGNSLASAAPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM
QVLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQ
TYAGGSVGGAVKLNHNLCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVL
YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGFSKGKYYSLNVPLDDG
IDDESYHFLFKPLIGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF
NVPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNME
NKNSHQLLEEIRSKLLDNLSRLQHAPSVQFQERPPDTELPEAEEDQDDADERWDPDSDMD
VDDERKPLPGRVKREIVEAEPKELEGQKGSSEHARGFDSAIDENASGKALDAGPMQIDEP
GVRVEQENVNKHSDQLYSK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggacactggtggcaattctcttgcgtctgctgctcctgatggggttaagagaaaggtt
tgctatttctacgatccagaagtcggcaactactattatggccagggtcaccccatgaag
ccccatcgcattcgaatgacccatgctctccttgcccactacggcttgcttcagcacatg
caggtcctcaagccctttcctgctcgtgaccgcgatctttgccgcttccatgctgatgat
tatgtctctttcctccgcagcatcacccctgagacccagcaggaccagctcaggcagctc
aagcgctttaacgttggcgaagattgtcctgtctttgatggcctctactccttctgccag
acttacgctggtggctctgttgggggtgccgtcaagttaaatcacaacctctgtgacatt
gctgtcaattgggctggtggcctccatcatgctaagaagtgtgaagcttctggtttttgc
tatgttaatgacatcgtgcttgcaatcttggagcttcttaaagtgcatgagcgtgttctg
tatgtggatattgacattcaccatggtgatggtgtggaggaagcattttacaccactgat
agagtcatgactgtttcattccataaatttggagattactttcccggcacaggagatata
cgtgacattggattttcaaaaggaaaatactactctctcaatgttccattggatgatgga
attgacgatgagagctatcatttcttgtttaaaccactaattggaaaagtaatggaagtt
tttaaaccgggtgctgtggttctccaatgtggtgctgactcattatctggggatagatta
ggatgcttcaatctttctatcaagggccatgcagagtgtgttaaatttatgagatctttc
aatgtgccattattgctgttgggtggtggtggctacaccattcgaaatgttgctcgctgc
tggtgctacgagactggagttgcacttggaattgaagttgatgataagatgccacagcat
gagtattatgagtactttggtccagattatactcttcatgttgcccctagcaacatggaa
aataagaattcccaccagttactcgaggaaatacggtctaagctccttgataatctttca
aggcttcagcatgcaccgagtgtccaatttcaggaaagaccacctgatactgagcttccg
gaggcagaagaagatcaggatgatgcagatgagagatgggatccagattctgatatggat
gttgatgatgaacgaaagccattaccaggcagagtgaagagagaaatagttgaagctgag
ccaaaggagttggagggtcagaaaggaagttctgagcatgctagaggatttgattcagca
atagacgaaaatgcaagcggaaaggctttggatgctggtcctatgcaaattgatgagcca
ggtgtgagagttgaacaggaaaatgtgaacaagcattctgatcagttgtactccaagtag
DBGET
integrated database retrieval system