KEGG   Populus alba (white poplar): 118032313
Entry
118032313         CDS       T07314                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
palz  Populus alba (white poplar)
Pathway
palz03082  ATP-dependent chromatin remodeling
palz03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    118032313
   03083 Polycomb repressive complex
    118032313
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:palz03036]
    118032313
Enzymes [BR:palz01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     118032313
Chromosome and associated proteins [BR:palz03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     118032313
   HDAC complexes
    Sin3A-HDAC complex
     118032313
    BRAF-HDAC complex
     118032313
    REST complex
     118032313
    SHIP complex
     118032313
    MiDAC complex
     118032313
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     118032313
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    118032313
  Chromatin remodeling factors
   NuRD complex
    118032313
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 118032313
NCBI-ProteinID: XP_034892881
LinkDB
Position
Unknown
AA seq 499 aa
MDTGGNSLASAAPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM
QVLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQ
TYAGGSVGGAVKLNHNLCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVL
YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGFSKGKYYSLNVPLDDG
IDDESYHFLFKPLIGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF
NVPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNME
NKNSHQLLEEIRSKLLDNLSRLQHAPSVQFQERPPDTELPEAEEDQDDADERWDPDSDMD
VDDERKPLPGRVKREIVEAEPKELEGQKGSSEHARGFDSAIDENASGKALDAGPMQIDEP
GVRVEQENVNKHSDQLYSK
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggacactggtggcaattctcttgcgtctgctgctcctgatggggttaagagaaaggtt
tgctatttctacgatccagaagtcggcaactactattatggccagggtcaccccatgaag
ccccatcgcattcgaatgacccatgctctccttgcccactacggcttgcttcagcacatg
caggtcctcaagccctttcctgctcgtgaccgcgatctttgccgcttccatgctgatgat
tatgtctctttcctccgcagcatcacccctgagacccagcaggaccagctcaggcagctc
aagcgctttaacgttggcgaagattgtcctgtctttgatggcctctactccttctgccag
acttacgctggtggctctgttgggggtgccgtcaagttaaatcacaacctctgtgacatt
gctgtcaattgggctggtggcctccatcatgctaagaagtgtgaagcttctggtttttgc
tatgttaatgacatcgtgcttgcaatcttggagcttcttaaagtgcatgagcgtgttctg
tatgtggatattgacattcaccatggtgatggtgtggaggaagcattttacaccactgat
agagtcatgactgtttcattccataaatttggagattactttcccggcacaggagatata
cgtgacattggattttcaaaaggaaaatactactctctcaatgttccattggatgatgga
attgacgatgagagctatcatttcttgtttaaaccactaattggaaaagtaatggaagtt
tttaaaccgggtgctgtggttctccaatgtggtgctgactcattatctggggatagatta
ggatgcttcaatctttctatcaagggccatgcagagtgtgttaaatttatgagatctttc
aatgtgccattattgctgttgggtggtggtggctacaccattcgaaatgttgctcgctgc
tggtgctacgagactggagttgcacttggaattgaagttgatgataagatgccacagcat
gagtattatgagtactttggtccagattatactcttcatgttgcccctagcaacatggaa
aataagaattcccaccagttactcgaggaaatacggtctaagctccttgataatctttca
aggcttcagcatgcaccgagtgtccaatttcaggaaagaccacctgatactgagcttccg
gaggcagaagaagatcaggatgatgcagatgagagatgggatccagattctgatatggat
gttgatgatgaacgaaagccattaccaggcagagtgaagagagaaatagttgaagctgag
ccaaaggagttggagggtcagaaaggaagttctgagcatgctagaggatttgattcagca
atagacgaaaatgcaagcggaaaggctttggatgctggtcctatgcaaattgatgagcca
ggtgtgagagttgaacaggaaaatgtgaacaagcattctgatcagttgtactccaagtag

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