Populus alba (white poplar): 118046989
Help
Entry
118046989 CDS
T07314
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
palz
Populus alba (white poplar)
Pathway
palz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118046989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118046989
Membrane trafficking [BR:
palz04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
118046989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
WD40
zf-RING_2
ANAPC4_WD40
CENP-B_dimeris
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
118046989
NCBI-ProteinID:
XP_034912016
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MTPITSENGVDGDDEREDDDDEEVEEDDDEEEEEEEEEEEEEEPRLKYQRMGGSIPSLLS
NDAASCIAVAERMIALGTLDGTVHILDFLGNQVKEFAAHTAAVNDLSFDIEGEYIGSCSD
DGTVVINSLFTDEKVLKFEYHRPMKAIALDPEYSRKMSKRFVAGGLAGQLYFNSKKWLGY
RDQVLHSGEGPIHAVKWRTSLIAWANDAGVKVYDAANDRRITFIERPRGSPRPELLLPHL
VWQDDTLLVIGWGMSVKIASIRANQQKGANGTYRDVPVSSMNQVDIVASFQTSYYISGIA
PFGDSLVVLAYIPVEEDGEKEFSSTISSRLGNAQRPEVRVVTWNNDELATDALPVHGFEH
YKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWH
EKALAAVEAGQGRSELVDEVGSRYLDHLIVERKYAEAASLCSKLLRGSAPAWERWVFHFA
HLRQLPVLVPYMPTENPRLRDTAYEVALVALATNPSFHKDLLSTVKSWPPLIYSALPVIS
AIEPQLNTSSMTDALKEALAELYVIDGQYEKAFSLFADLMKPDIFDFIEKHSLHDTIREK
VVQLMLLDCKRTVPLLIQNKDLISPPEVVSQLLTASNKCDSRYFLHLYLHALFGANPHAG
KDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYDICVKRGLLREQVFILGRMGNSKKA
LAIIINKLGDIEEAVEFVTMQHDDELWEELIKQCLHKPEMVGVLLEHTVGNLDPLYIVNM
VPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLVKYYKEARRAICLSNEE
DARAKRDGSRDSQAVGRTTSARTMEVKSKTRGETRCCMCFDPFSIRDVSVVTFFCCHAYH
MSCLMDSMHTVSSRKGSGATSGMSEYDSTDEDDENEETVSGVPRLRCILCTTAAS
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgactccaattacgtcggagaatggcgtcgatggcgacgacgagcgagaagacgacgac
gatgaagaagtagaggaagatgatgatgaagaagaagaggaggaggaggaggaggaggag
gaggaggaaccaagactcaagtaccaaagaatgggaggtagcataccttctcttttatcc
aatgatgcggcgtcgtgtattgctgttgccgaacgcatgattgctctcggcactctagac
ggcaccgttcacatcctcgatttcctcggcaaccaggttaaggaatttgcggcacataca
gcggcggttaatgatcttagctttgatatagaaggagaatatataggaagttgttcagac
gatggcactgttgtaattaatagtcttttcaccgacgagaaggttttgaagtttgaatat
catcggccgatgaaggcaattgctttagaccctgaatattctagaaaaatgtctaaaaga
tttgttgctggtggtttagctggtcaattgtattttaactccaagaaatggctaggctac
cgtgaccaggttttgcactctggggaaggtccgatacatgctgtgaagtggagaacgagt
ctcattgcgtgggctaatgatgcgggtgtgaaagtttatgatgctgctaatgatcgaaga
ataacttttattgaaagaccgcgaggtagtccgcgtccggagcttttactcccgcattta
gtttggcaggatgatactctcttggttattgggtggggaatgtctgtaaaaatagcatcg
ataagagcaaatcagcaaaagggagctaatgggacatatagggatgttccggtgtctagt
atgaaccaggtggatattgtggcttcttttcaaaccagctattatatttcaggaattgct
ccatttggtgattctttggttgttctagcttatattcctgtggaagaagatggagagaag
gaattcagtagcaccatttcatcaagactgggcaatgcacagagaccagaagtacgagta
gttacatggaataatgatgaacttgcaacagatgccctacctgtacatggttttgagcat
tacaaggcgaaagactattcccttgctcatgctcctttctcaggtagcagctatgctggt
ggtcaatgggctgctggtgatgaaccattatactatatcgtttccccgaaggatgtggtg
attgcaaagcctagggatgctgaagatcatattgcgtggcttctagaacatggttggcat
gaaaaagcgttggcagcagttgaagcaggccagggtaggagtgaactcgttgatgaggtg
ggatccagatatcttgatcatttgatcgtggaaaggaaatatgctgaagctgcatctttg
tgttccaaactgctgcgagggtctgctccggcatgggaaagatgggttttccattttgct
catttgcgtcagcttcctgtgttggtcccttacatgccaacagaaaaccctagacttcgt
gatactgcttatgaggttgctcttgtagctctggcaacaaatccatcttttcataaagat
ctcttgtcaactgttaaatcttggccacctttgatttattctgcattgcctgttatatct
gctatagaacctcagctaaatacttcttctatgacggatgcactcaaggaggcactagca
gagttatatgtaattgatgggcaatatgagaaagccttttcactttttgctgatctcatg
aagccagatatatttgatttcattgaaaagcacagcttacatgataccatacgtgaaaag
gttgtccaactgatgttgcttgattgcaaacgcacagttcctctcttgatccagaacaag
gacttaatttctccacctgaagttgtctcgcaactgctgactgccagcaataagtgtgat
tcaagatatttcctacacttatatcttcatgcattatttggagcaaatccacatgcagga
aaggattttcatgatatgcaagtagagctttatgcagattatgatctgaaaatgctacta
ccttttctccggagcagccaacattacacccttgagaaggcatatgacatttgtgtcaaa
agaggtcttttaagagagcaggtcttcatacttggaagaatgggaaactcaaaaaaggcg
ctagctatcatcataaataaattaggggacattgaagaggctgtagaatttgtaaccatg
cagcatgatgatgagctatgggaagaattaattaagcaatgtcttcacaaacctgaaatg
gtgggggtattgttggagcacactgttggcaatcttgatcctttatacattgtaaatatg
gtgcccaatggcttggaaataccccggctcagggaccgactagtcaaaattatcaccgat
tacagaactgaaacatctctgagacatgggtgcaatgatattcttaaggctgattgtgta
aatctcttggtcaaatactacaaagaagcgagaagggcaatttgcttaagcaacgaagaa
gatgctcgagcgaaaagggatggcagtagggattcacaagcagttgggagaacaacaagt
gcaagaaccatggaggttaagtcaaaaactaggggagaaacaagatgttgcatgtgtttt
gatcccttctctatacgagatgtatcagtcgtcacattcttttgctgtcatgcttatcac
atgtcttgtcttatggattctatgcacactgttagtagcagaaaagggagtggagccact
tctggaatgtcggaatatgatagcactgacgaggatgatgaaaatgaggaaaccgtttct
ggtgttcctcggttgagatgtatcttatgtaccactgctgctagttga
DBGET
integrated database retrieval system
