Populus alba (white poplar): 118062604
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Entry
118062604 CDS
T07314
Name
(RefSeq) nuclear pore complex protein NUP214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
palz
Populus alba (white poplar)
Pathway
palz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118062604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118062604
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118062604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
118062604
NCBI-ProteinID:
XP_034932321
LinkDB
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Position
Unknown
AA seq
1867 aa
AA seq
DB search
MGLGKEGETKTEFEEEKEGDHVESSDYYFDKIGKPIPILSDQTVSPFPLQNPPLPSRPLA
LSQHHRLIFVAHPSGFLVARTKDVMDAAMDIKEKGSSSSSSIQRVSLVDVPIGKVHILTL
STDSSTLAVSVAAHIHFFHVHSLLDMVQKPSFSCSLSEPSSSTVKDIQWRRRPDNSYLVL
SNQGKLYHGALAAGTHTLKHITDNVDAVEWSLKGKYIAVARGSRISILSSNFKERFSISL
PFRSWIADGDDNCTVKVDSIRWVRHDSIIVGCFQQTADGKEENYLLQVISRKDGKIYDSS
SKPVVLSFYDLFSGLVDDIVPYGSGPYLSLDYLEQCGLAITANKKNTDQHIVLLGWSVED
GMSETAVIDIERDTWLPRIELQENGDDNLIMGLCVDKVSLYGKVKVEVGVEEQKELSPYC
VLMCVTLEGKLVMFQVASATGANIQPEVDSSLEDKKEDIALEHEGCDQSNLSSSGLHEET
LEDITLGLQPQHVSNKELQLNKDGGIPTQKELVPADKDEIPEKLDIKSLSAQQSVKLGQS
SLKASFPEIPNYLGSDSSKTETQRLAGFASRSALSGKVLTDAPSISSRKDLANTADLFKA
PPREVGSNALPGVPSQSWSSGKVTLSASTLIQGNRPDYNNVQVGAANVPSDLGSKSFCMK
DTTGQLTSVNASVRPALEGEQRGSIVSGTIESLPAFRNSQLSSHENFASARSPNHRLKYS
KDNYKTSSLRSSEPNLSKQFGNIKELAKELDTLLECIEEKGGFRDACTVFLRGSVEALEE
GMGTLSENCRMLKSVMDEQLGEIHHLLDKTVQVLARKIYIDGIVKQASDSQYLELWNHQK
LSSELELKRRCILKLNQELTNQLIQLERHFNALELQSFGGNAGFHTDRRTLQIRNMPSRQ
LQSLHSLQNTMSSQLAAAEQLSECLSKQMSMLSLESPVRQKNVKKELFETIGIPYDASFS
SPDATKVGDTTSLKKLLLSSGSAATKGKSRRHQSSAMKSSDSETSRRRRDSLDQSWASFE
PTKTTVKRVLLQENQKKNVNKSFLLKDREIFSSGLGDISTVHQEDQTSRSFLHPLENKGL
HYGSPKQTFEKKATVPFKWATDPPMSSQPLGLRSPILQNNNVAMVSVSSSLVSLPGGETS
SREAYNMTADKSKCKFSQIEKPDSVSTNETRRIQQTETNINKNSADSTVPPMQTPLFPKK
PNEIPVSTTSSVLAKSAMQSVKPGPADTKSSFFKSPNNNYEPALSLLGASSVAPTQPGKV
PEINFATSKSQPSEKVSSSPSAFISLSVSSSLISNISPNISSSIATPTLSAAMPPSTSLT
SSKVTTGSNQTVTSTSLSSVSVSPVLSSGSLSFQAPRTVLPSHAPPPTSEVSPELQPPLG
KTLPSSNPSPSCLTSESLETDIQPLIGKPARNVNPTPTPSVSESLKTEPQPHAGKIPPSD
TPVTPSESDSPKTEVPHPPGEASSKSDVDVPTTAPQPNPSTFGLKLEPSASSVLTTGLST
GFAPVNQPSLNHSGSTASKVALNSQPQQPSSHNVPFGAPILTSNSVSGKNESLDVAVTEE
VEMEEEAPEASCTNELNLGNLGGFGIGSTPIPTAPRANPFGSPFGSTGSNVASSSLTMTV
PSGELFRPASFNFQSPHPSQKPPPTNMGAFSGGFGTGTVAQAPAQSQFGQPAHIGSGQQA
LGSVLGTFGQSRQFGTGLPGSGFASTSGFGGGLATSSSTGGFASAATAGGFAGVASTGGG
FAALASSGAGFGGVAAGGAFGSVASGGGFGGVASGGSGIAGVASGGGGFAAAASSAGGFA
AAPPSGSGFGASGSGFGAFGSQQGTGGFSGFPGNAGGSQQGIGGFSAFSGNPAGTGKPAE
LFTQMRK
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atgggtttaggaaaagagggagaaacaaaaacagaattcgaagaagagaaagaaggagat
catgttgaaagcagcgattactacttcgataagattgggaaacccattcccatcctctct
gatcaaactgtttcccctttccctttgcaaaaccctcctcttccctctcgccccctcgcc
ctctcccaacaccaccgtctcatcttcgtcgcccatccctccgggtttctggttgcgagg
actaaagatgtcatggatgccgctatggatattaaggaaaaaggaagctcttcttcttcg
tccattcaacgtgtcagtcttgtggatgtccctattgggaaagttcacattttgacactc
tctactgactcctctactcttgctgtttctgttgctgctcatattcacttcttccatgtc
cattcccttctcgatatggtgcaaaaaccgtccttctcttgctctctgagtgaaccatca
tcatctactgtcaaggacatacaatggcgaaggagaccggacaattcttaccttgttctt
tcaaatcaggggaagctatatcatggtgctcttgctgccggcacccatactcttaaacac
ataacggacaatgttgatgctgttgaatggagtctaaaaggaaaatatattgctgtcgca
agagggagtcgtatcagcattttgtcctcaaatttcaaggaaaggttcagtatatccctc
ccattcagatcatggattgctgatggtgatgataactgcactgtcaaagtggactctatc
agatgggtacgtcatgatagtatcattgtaggatgctttcagcaaactgcagatggaaag
gaagaaaattaccttcttcaagtaatcagcagaaaagatggcaagatttatgatagttct
tccaagccagtcgtgctatcattctatgatctattttcgggtcttgttgatgatattgtg
ccctatggaagtggaccttatttatccctggactatttagaacaatgtgggcttgcaatt
acagctaacaagaagaacacagatcagcacattgtgttgcttggttggtcagtggaggat
gggatgagtgaaactgcagttattgacattgaacgagatacttggctccctaggattgag
cttcaagaaaacggagatgataatttgatcatggggctctgtgttgacaaggtttccctc
tatggaaaagtaaaagttgaagtgggggttgaagaacagaaagaactttcaccctactgt
gttcttatgtgtgttactcttgagggaaagcttgtcatgttccaggttgcaagtgccaca
ggggctaatattcaaccagaagttgattcttcccttgaggataagaaagaggatattgct
ttggaacatgaaggatgtgatcagtctaatctttcttcttctgggttgcatgaagaaaca
ttggaagacataactctaggtcttcaaccacaacatgtgagcaacaaggaactacagctc
aataaagatggtggaattcctacacagaaggaacttgttcctgctgacaaggatgagatt
cctgaaaaactggatataaaatcactttctgcacaacaaagtgtgaaattagggcagtca
tctttgaaggcctcattcccagagatacctaattatttagggagtgattccagcaaaaca
gaaactcaaagacttgctggatttgcgtctagatccgccttatctggaaaagttttaact
gatgcccccagcatatcaagtcgaaaggatttagcaaacactgctgatctttttaaggca
cctcctagggaagttggatcaaatgctttaccaggtgtcccatctcagtcatggtcaagt
ggaaaagttacattatcagcttcaactttgattcaaggaaatagacctgattataataat
gttcaagttggtgctgcaaatgttcctagtgaccttggcagtaaatctttttgcatgaag
gatactactggtcaattaacttctgtcaacgcttctgttagaccagctcttgagggggaa
caaagaggttcgattgtgtcagggacaattgaatcattgcctgcctttcgaaactcacag
ctgtcatctcacgaaaattttgcttcagccaggtctccaaaccacagacttaagtattca
aaagacaactacaaaacttcatccctgaggagttccgagccaaacttatcaaaacaattt
ggtaatattaaagagctagccaaagagttggatacacttctggaatgcattgaagaaaaa
ggtggtttcagggatgcctgcactgtttttctgagaggctcagttgaagctttggaggag
ggcatgggaactctctctgaaaattgcagaatgttgaagagtgtgatggatgagcagctt
ggagagatccatcatcttctagataaaactgtgcaagttttggcaaggaaaatatatata
gacggtattgtcaagcaagcttctgatagccaatatttggaactctggaatcaccaaaag
ttgagctctgaacttgagttgaagcggcggtgtatactaaaactaaatcaggagttgact
aatcagttgattcaattggagagacacttcaatgccctcgaacttcagagttttggtgga
aatgctggatttcacacagatcggagaactttgcagattagaaatatgccttcaagacaa
cttcagtccttgcatagtttacaaaacacaatgagttcacagttagcagctgctgaacaa
ctttctgaatgtctctcaaaacaaatgtccatgctgagtttagagtcacctgtaagacaa
aagaatgtcaagaaggaactttttgaaacaattggaatcccgtatgatgcctcttttagc
tcaccagatgcaacaaaagttggtgataccacttcattgaagaaacttttactttcttcg
ggttctgctgccactaaaggtaagtctaggagacaccaatcaagtgctatgaaaagttct
gattcagaaacttcaaggagaaggagggactcgcttgatcagagctgggcaagttttgag
cctacgaaaacaactgtaaaaagggtgcttttgcaagaaaatcagaagaaaaatgtgaac
aaatcattcttgttgaaggatagggaaatttttagttctggcttgggggacatctccaca
gttcaccaagaagaccagacatcccgatctttcttgcacccattggaaaacaaaggcctt
cattatggatcccctaaacaaacgtttgagaaaaaagcaaccgttccatttaaatgggct
actgatcctccaatgtcatcacagcctctgggcttgcgttctcctatactgcaaaataac
aatgtagcgatggtatcagtttcgtcatccctggtatcacttccaggaggagaaacaagt
agcagggaagcctacaacatgactgctgataaatctaagtgtaagttttctcaaattgag
aagcctgattctgtttccaccaatgagaccagacgtattcagcaaactgaaactaatata
aataaaaattcagcagactctaccgtgccaccaatgcagacacctttgtttccaaagaaa
ccaaatgagattcctgtttcaactaccagtagcgtgcttgcaaagtcagcaatgcaaagt
gtgaagcctggaccagcagacaccaaaagttcatttttcaaatctcccaataataattat
gagcccgcgctctctttgttaggtgcctcttctgtggctcccacccaacctggaaaggtt
cctgagatcaattttgctactagcaaaagccagcctagtgaaaaagtttcgtcttctcca
tcagccttcatatcactttcagtttcatcatctctgatatccaatatatcaccaaacatc
tcatcatcaatagctacaccgacgttgtcagctgcaatgccaccgagcacatctttaacc
agttctaaggtcaccactggctctaatcaaacagttacttcaacatcattgtcatcagtt
tctgtctcacctgttctttcttccggttcattgtcttttcaggcccccaggacagtgtta
ccctcacatgccccacctccaacttcagaggtttctccagagctgcaaccccctctaggc
aaaactctgccttctagcaatccaagtccttcatgtttgacatcagaatcccttgaaaca
gatattcagcctcttataggaaaacctgcacgaaatgtaaaccccactcctacaccttca
gtttcagaatcacttaaaacagagccccaacctcatgcgggaaaaattccaccttctgac
actccagttaccccttcagagtcagattccccgaaaacagaggttccccatcctccgggt
gaagcaagttcaaagtcagatgtggatgttcctacaactgctccacagcctaacccttct
acttttggtttgaagcttgaaccttcagcatcatctgtccttactacaggactatcaact
ggatttgcaccagtaaaccagcccagcttgaaccactctggaagtactgcatctaaggtg
gctctgaattctcaacctcaacagccttcttctcataatgttccttttggagcaccaatc
ctgacttctaatagcgttagtggaaagaatgaaagtttggatgttgcagttacagaagag
gttgaaatggaggaggaggctcctgaggctagctgcacgaatgaacttaatttgggaaat
cttggaggttttgggattggttcaacgcctatcccaactgctcctagagcaaatccattt
ggcagtccatttggtagcacaggatcaaatgtagcaagctcgtcgttgaccatgactgta
cctagtggagagctctttcgacctgcctctttcaactttcaatctccccatccatcccaa
aagcctccaccaacaaatatgggtgctttctctggtggctttggcacaggaacagttgct
caagctcctgctcaaagtcagtttggccagccagcacatattggatcaggacagcaagca
ctgggatcagttcttgggacttttgggcagtctagacagtttggaactggtttacctgga
agtggtttcgcttctaccagtggttttggtggtggccttgctactagtagttcaacaggt
ggctttgcaagtgctgcaactgctggcgggtttgctggtgttgcttctactggtggtgga
tttgctgctttggcctcatctggtgcaggatttggtggtgtggctgctgggggtgcgttt
ggtagtgtagcttctggtggtgggtttggtggagtggcatctggtggcagtggcattgct
ggtgtggcttcaggtggaggtgggtttgccgcagcagcctcgagtgctggtggtttcgca
gcagcgcctccatctggtagtggattcggtgcatcaggtagtggatttggggcttttggc
agccaacaaggcactggaggattctcaggttttcctggtaatgcaggaggcagccaacaa
ggaattggtggtttctctgctttcagtggtaatccagcaggaactggaaaacctgcggaa
ttatttacacagatgagaaaatag
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