Pantoea ananatis LMG 20103: PANA_0951
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Entry
PANA_0951 CDS
T01195
Symbol
sbcC
Name
(GenBank) SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pam
Pantoea ananatis LMG 20103
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pam03400
]
PANA_0951 (sbcC)
DNA repair and recombination proteins [BR:
pam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PANA_0951 (sbcC)
Archaeal homologous recombinant proteins
PANA_0951 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
MobB
cobW
nSTAND3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADD76118
UniProt:
D4GL72
LinkDB
All DBs
Position
complement(1097539..1101213)
Genome browser
AA seq
1224 aa
AA seq
DB search
MKILTLRFKNLNALKGEWFIDFRTEPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR
LGAISQGHNPLMTRDCAECLAEVEFEIKGEAWRAFWSQNRARGTADGKLQAPRVELARCA
DNQIVADKVGDKLKLTETLSGLDFERFTRSMMLSQGQFAAFLNAKANERAELLEELTGTE
IYGLVSMAAFERHKEAKNTLELMRSRAGGMALLDEATRAGLQQQQAALTEAEQQLSRQFD
TAQRQQQWLQLAQQLSADAEQVNAARQAADAASQAAEADRQRLARSEPAEKLRGALQQRD
NLQTERAELQQRQQQLNQQMQATAHEQQQLQQRYQETEAAREQVRLQQHQQETLLSGQVI
PLDQALSALQQQIQQLQHETAQQQASCTQREQAMQTEQHKVSDLQQALAQQQARRQQLAD
MPVWGENLPLWQDRFAQLARHEIDQAASAQQIQQQALQLHQRQQQVEQLQQQLAPLNQAG
QLTQQALSDAEQALTSLHKAHPPEALRQALKQLTQQRDARQTLTLLAAQWQPLHQQRGQY
EKRLQDLEKACQQAEAELLTLRETWKREKQQLTDVEKICQLESHIADLEEHRARLEAGQP
CPLCGSCEHPAVETYRTLEVSANQQRKAVLQKQVEALSETGTAKNEQIKHLKGQQQSLRD
ELASVVQQLDALTQRWQALSGELALTFTLNDTDALDHWLQAQSRQEQALTSQTETLEHAE
RTYQAAKEQHLQQQQTQQQHQQTLQLTQQQLENEHQALLTLQRHHQQAQANAQPLQEGLA
QQFAGFGLTLPDSAQRDSWLAEQQQRWQQWQESERLLANLQPQLARAESQADALRQQLQL
EQQRLNQQQQQLAALDQQYREKRQQREALFGDRDVIQARRQMQESVEHHEAQLTQQRERL
QQSQAEASRLHGQLTLLESQLHRLGTRLTDAEQHFNAALTAAEFPDEASLRAALLDEHEA
QQLRQRLQQIDQHLLHQQSRLAELQQRLATHEQAKPDNMPESADALTTLLEALRHSLREN
ASQQGQLQQQLQSDASLRTQQQTLLAQIAQEETTLAQWALLNDLIGSATGDKFRRFAQGL
TLDHLVALANRQLDRLHGRYLLQRRAIDALELDVVDTWQADSARDTRTLSGGESFLVSLA
LALALSDLVSHKTRIESLFLDEGFGTLDAETLDTALDALDALNASGKTIGVISHVEAMKE
RIPVQIKVRKMNGLGYSKLELPGT
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcacgctgcgattcaaaaacctgaatgcgctgaaaggagaatggtttatc
gattttcgcaccgaacctttcgccagtaatggtctgtttgccattaccggcgcgacaggt
gccggtaaaaccaccttactggacgctatctgcctggcgctgtatcaccagacgccgcgc
ctgggggcgatttctcagggccacaacccgctgatgacgcgcgactgcgccgagtgcctg
gccgaagtcgagtttgaaatcaaaggcgaggcctggcgggcattctggagccagaaccgc
gcacgaggcacggccgacggcaaactgcaggctccccgcgtcgagctggctcgctgcgca
gataatcagatcgttgcagacaaagtgggcgacaagctcaagcttaccgaaacgcttagc
ggcctggattttgaacgttttacccgttcaatgatgctgtcacagggccagttcgccgca
tttcttaacgccaaagcgaatgagcgcgcagagctgctggaagagctgaccggaacggaa
atttacgggctggtttccatggccgcgtttgagcgccataaagaagccaaaaatacgctg
gaactgatgcgcagtcgggcaggcggcatggcactgcttgatgaggcgacccgcgccggg
ctgcagcaacagcaggcagccctgactgaggccgagcagcaactcagccgtcagtttgac
accgctcagcggcagcagcagtggctgcagctggcacagcagctgagcgcggacgctgaa
caggtgaacgccgcccgtcaggccgccgacgcggcgagtcaggcggcagaggccgatcgc
cagcgtctggcacgaagtgaaccggcagaaaaactgcgcggtgcgctgcaacagcgcgac
aacctgcagactgaacgcgcggagctgcaacagcgtcagcagcagttaaaccagcagatg
caggcgaccgcccacgagcagcagcagttgcagcagcgttatcaggaaaccgaagcggcg
cgcgaacaggtgcgtttgcaacagcaccagcaggaaacgctactgagcggacaggttatt
ccactcgatcaggcgctctcggccctgcagcagcaaattcaacagctgcagcatgaaacc
gcacagcagcaggcgagctgtacgcagcgtgaacaggcgatgcaaaccgagcaacataag
gtcagcgatctccagcaggcgctggcacagcagcaggcgcgtcggcaacagctggcagat
atgccggtttggggcgaaaatcttccgctgtggcaggaccgctttgctcaactggcccgc
catgaaatcgatcaggcggcgtcggcgcagcagattcagcaacaggcgttgcagctccat
cagcgccagcagcaggtcgaacagctgcaacaacagcttgcgccattgaaccaggccggg
cagctcacgcagcaggccttgtctgacgctgagcaagcactaacatcgcttcataaggcg
catcctcccgaagccttgcgtcaggccttaaagcagttaactcaacagcgtgacgcacgt
cagacgctgacgttacttgcagcccagtggcagccgctacatcagcagcgcggtcagtat
gaaaaacggttacaggatctggaaaaagcctgccagcaggctgaggctgaattactgacg
ctgcgggaaacatggaagcgggagaaacagcaactcaccgacgtggagaagatttgccag
cttgaaagccatattgccgatctggaggaacaccgggcgcggctggaggccgggcaaccc
tgccctttgtgcggttcctgcgaacaccccgcggttgaaacctaccgcacgctcgaagtc
agcgccaaccaacagcgcaaagccgtgctgcaaaaacaggtggaagcactgagcgaaacc
ggtacggccaaaaatgagcagataaaacacctgaagggccagcagcagtctctgcgcgac
gagctcgccagtgtagtgcagcagctggatgcattgacccagcgctggcaggcactgagc
ggtgagcttgcgcttaccttcactctgaacgacaccgacgcgctggaccactggctgcag
gcgcaaagccgtcaggaacaggcattaacttcgcagacagagacgctggaacacgccgag
cgaacgtatcaggcggcaaaagaacagcatctgcaacagcagcagacacagcagcaacac
cagcaaacgctgcagttgacgcaacagcagctggagaacgaacaccaggcgttactgact
ttacagcgccatcaccaacaggctcaggcgaatgctcagccgctccaggaggggctggcg
caacaattcgcaggcttcggcctgacgctgcctgacagcgcacagcgcgacagctggctg
gctgaacagcaacagcgctggcagcagtggcaggaaagtgagcggttgcttgctaacttg
cagcctcagttggcgcgcgcggaaagccaggctgacgccctgcgccaacagctgcagctt
gagcagcagcgcctgaatcagcagcaacagcagctcgccgcactggaccagcaataccgc
gaaaaacgtcagcagcgtgaggcgttgtttggcgatcgggatgtcattcaggcccgtcgg
cagatgcaggagagcgtcgagcatcatgaggcgcagctgacgcagcagcgtgaaaggctg
cagcagtctcaggctgaagccagccgcctccacggccaactgacgttgctggagagccag
ctacacaggttgggcactcgcctgacggacgctgagcagcacttcaacgccgcgctgact
gcggctgaattcccggacgaggcgagcctgcgggccgcgttgcttgacgagcatgaagcg
caacagcttcgccagcgactgcagcagatcgatcagcatctgctccatcaacaatcccgc
ctggcagagctgcagcaacggctggcaacccacgagcaggctaaacccgataatatgcct
gagtccgccgatgcactgaccacactgctggaagcgttgcggcattctctgagggagaac
gccagtcagcagggtcaactgcagcagcagttgcaaagcgacgccagcctgcggacccag
cagcaaacgttgctggctcagattgcgcaggaggaaaccacgctggcgcagtgggcgttg
cttaacgatctgatcggctcggcgaccggggataaattccggcgctttgcccagggactc
acgctcgatcacctggtggcgctggctaaccgccagctggatcgtctgcatggtcgctac
cttttacagcgccgcgccatcgatgcgctggaactggacgtggtggatacctggcaggcg
gacagcgcacgcgatacccgcacgctgtcaggtggagaaagctttctggtgagccttgcg
ctggcgctggcgctgtccgatctggtcagccataaaacgcgcatcgagtcgttatttctt
gatgagggtttcggcacgctggatgcagagacgctggatactgcactggatgcgctggat
gcgctcaatgccagtggaaaaaccattggcgtgatcagtcacgtcgaggcgatgaaagag
cgcattccggtgcaaattaaggtccgcaaaatgaatggcctgggttacagcaaacttgaa
ttgccaggtacgtaa
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integrated database retrieval system
