Pseudomonas amygdali: BKM19_009625
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Entry
BKM19_009625 CDS
T05354
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00300
Lysine biosynthesis
pamg01100
Metabolic pathways
pamg01120
Microbial metabolism in diverse environments
pamg01230
Biosynthesis of amino acids
Module
pamg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BKM19_009625
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pamg01002
]
BKM19_009625
Enzymes [BR:
pamg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
BKM19_009625
Peptidases and inhibitors [BR:
pamg01002
]
Metallo peptidases
Family M20
BKM19_009625
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
AVB13833
UniProt:
A0A0N0XDI5
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Position
complement(1853463..1854614)
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AA seq
383 aa
AA seq
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MTAPTDLSPTLQLACDLIRRPSVTPVDADCQAVMMQRLGNAGFKLEPMRIEDVDNFWATH
GTTDGPVLCFAGHTDVVPTGPVENWQNDPFDALIDEHGMLCGRGAADMKGSLAAMLVAAE
RFVADHPNHKGSVAFLITSDEEGPAHHGTKAVVERLAARKERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGATLTVRGKQGHVAYPHLAKNPIHLAVPALAELAAEHWDHGNDFFPPTSFQ
ISNLNAGTGATNVIPGDLVAVFNFRFSTESTVEGLQQRVAAILDKHELDWHVNWALSGLP
FLTEPGALLDAVSSSIKSVTGRDTKASTSGGTSDGRFIATLGTQVVELGPVNATIHQVNE
RILASDLDVLTEIYYQTLVKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgactgcccctaccgacctgtcgcccacccttcaacttgcctgcgatctgatccgccgc
ccgtcagtgacgccggtcgatgccgactgtcaggcagtgatgatgcaacgcctgggcaat
gccggcttcaagctggagcccatgcgtatcgaagacgtcgataacttctgggccacacac
ggcactaccgacggcccggtactgtgtttcgcaggtcatacggacgtggtccctaccggc
ccggtggagaactggcagaacgacccgttcgatgcgttgatcgacgagcacggcatgctc
tgcggacgcggtgcagcggacatgaaaggcagcctggcagccatgctcgtggccgccgag
cgctttgtagccgatcacccgaatcacaagggttcggtggcattcctgatcaccagtgac
gaagaaggcccggcgcaccacggcaccaaggctgtcgtcgaacgtctggcagcgcgcaag
gagcgtctggactggtgcatcgtcggcgaaccttcgagcaccacgctggtgggcgatgtg
gtcaagaacgggcgtcgtggctcgctgggcgccaccctcaccgtgcgcggcaaacagggc
catgtggcttacccgcatctggcgaagaaccctattcaccttgcagttccggcacttgcc
gaactggctgcagagcactgggaccatggcaacgatttcttcccgccaaccagcttccag
atctccaacctgaacgccggcacgggtgcaaccaatgtcatcccgggtgatctggtggca
gtattcaacttccgtttttcgaccgagtcgaccgtcgaaggcttgcagcagcgtgtcgcc
gccatcctcgacaagcatgagctggactggcatgtgaactgggcgttgtccggcctgccg
ttcctgaccgagccgggcgcattgctggacgccgtgtcgtccagcatcaaaagcgtcacg
ggccgtgacaccaaagcctcgaccagcggcggaacctccgacggccgtttcatcgcgacc
ctgggtacgcaagtggttgaactggggccggtcaacgcgacgattcaccaggtcaacgag
cggattctggccagcgatctcgacgtgctgaccgagatctactaccagaccctggtcaag
ttgctcgcctga
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