Pseudomonas amygdali: BKM19_013580
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Entry
BKM19_013580 CDS
T05354
Symbol
ihfA
Name
(GenBank) integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pamg03032
]
BKM19_013580 (ihfA)
03036 Chromosome and associated proteins [BR:
pamg03036
]
BKM19_013580 (ihfA)
03400 DNA repair and recombination proteins [BR:
pamg03400
]
BKM19_013580 (ihfA)
DNA replication proteins [BR:
pamg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BKM19_013580 (ihfA)
Chromosome and associated proteins [BR:
pamg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BKM19_013580 (ihfA)
DNA repair and recombination proteins [BR:
pamg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BKM19_013580 (ihfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Meth_synt_1
SNF5
Motif
Other DBs
NCBI-ProteinID:
AVB14514
LinkDB
All DBs
Position
2716749..2717051
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AA seq
100 aa
AA seq
DB search
MGALTKAEMAERLYEELGLNKREAKELVELFFEEIRHALEDNEQVKLSGFGNFDLRDKRQ
RPGRNPKTGEEIPITARRVVTFRPGQKLKARVEAYAGTKS
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgggggctctgacgaaagctgagatggccgaacgtctgtacgaagagctgggcctgaat
aaacgggaagccaaggaactggtcgaactgttttttgaagaaatcaggcacgctctggaa
gataacgagcaggtgaagttgtcaggttttggcaacttcgaccttcgagacaagcgccag
cggcctgggagaaatcccaagaccggtgaagaaattccgattacggcgcgccgtgtggtc
acctttcgtccagggcagaagctgaaggcccgagttgaggcatatgctggaaccaagtca
taa
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