KEGG   Pseudomonas amygdali: BKM19_023495
Entry
BKM19_023495      CDS       T05354                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
pamg  Pseudomonas amygdali
Pathway
pamg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pamg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BKM19_023495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pamg03400]
    BKM19_023495
Enzymes [BR:pamg01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     BKM19_023495
DNA repair and recombination proteins [BR:pamg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BKM19_023495
 Prokaryotic type
     BKM19_023495
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AVB16190
UniProt: A0A2G4DDE3
LinkDB
Position
complement(4811203..4811895)
AA seq 230 aa
MTSDDRIKLEPSWKEALRDEFEQPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNSTPLN
NVKVVILGQDPYHGPNQAHGLCFSVQPGVPTPPSLVNIYKELKRDLNIDIPNHGCLQSWA
DQGVLLLNTTLTVERANAASHAGKGWQHFTDRIIQVVSEHQPHLVFLLWGAHAQSKQKLV
DATKHLVLTSVHPSPLSAYKGFLGNGHFGRANKYLEQNGIEPIDWRLPVL
NT seq 693 nt   +upstreamnt  +downstreamnt
atgactagcgacgaccgcatcaagcttgagcccagctggaaggaagcgctgcgcgatgaa
ttcgagcagccctatatggcgcagttgcgcgagtttctgcgccaggagcatgccgcgggt
aaagagatctatccgcctgggccgctgattttcaatgcgctgaattcgacgccgctcaac
aatgtgaaagtggtgattctcggtcaggacccgtatcacggtccgaatcaggctcacggt
ctgtgtttctcggtgcagccaggcgtgccgacgccgccgtcactggtcaatatctataaa
gaactcaaacgcgacctgaatatcgacattcccaatcacggctgcctgcaatcatgggct
gatcagggcgtgctgttgcttaacacgactcttaccgtcgagcgcgccaacgcagcttcg
catgcgggaaaaggctggcagcacttcacggaccggatcattcaagtggtcagcgagcat
cagccgcatctggtgttcctgctgtggggcgctcatgcgcagagcaagcagaaactggtc
gatgcgaccaagcacctggtgctgacctccgtccatccttcgccgttgtcagcctacaaa
ggcttcctgggtaacgggcatttcgggcgggccaacaagtaccttgagcaaaacggcatc
gagccaatcgactggcgcttgcccgttctctga

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