Pseudomonas amygdali: BKM19_023495
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Entry
BKM19_023495 CDS
T05354
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BKM19_023495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pamg03400
]
BKM19_023495
Enzymes [BR:
pamg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BKM19_023495
DNA repair and recombination proteins [BR:
pamg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BKM19_023495
Prokaryotic type
BKM19_023495
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AVB16190
UniProt:
A0A2G4DDE3
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All DBs
Position
complement(4811203..4811895)
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AA seq
230 aa
AA seq
DB search
MTSDDRIKLEPSWKEALRDEFEQPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNSTPLN
NVKVVILGQDPYHGPNQAHGLCFSVQPGVPTPPSLVNIYKELKRDLNIDIPNHGCLQSWA
DQGVLLLNTTLTVERANAASHAGKGWQHFTDRIIQVVSEHQPHLVFLLWGAHAQSKQKLV
DATKHLVLTSVHPSPLSAYKGFLGNGHFGRANKYLEQNGIEPIDWRLPVL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactagcgacgaccgcatcaagcttgagcccagctggaaggaagcgctgcgcgatgaa
ttcgagcagccctatatggcgcagttgcgcgagtttctgcgccaggagcatgccgcgggt
aaagagatctatccgcctgggccgctgattttcaatgcgctgaattcgacgccgctcaac
aatgtgaaagtggtgattctcggtcaggacccgtatcacggtccgaatcaggctcacggt
ctgtgtttctcggtgcagccaggcgtgccgacgccgccgtcactggtcaatatctataaa
gaactcaaacgcgacctgaatatcgacattcccaatcacggctgcctgcaatcatgggct
gatcagggcgtgctgttgcttaacacgactcttaccgtcgagcgcgccaacgcagcttcg
catgcgggaaaaggctggcagcacttcacggaccggatcattcaagtggtcagcgagcat
cagccgcatctggtgttcctgctgtggggcgctcatgcgcagagcaagcagaaactggtc
gatgcgaccaagcacctggtgctgacctccgtccatccttcgccgttgtcagcctacaaa
ggcttcctgggtaacgggcatttcgggcgggccaacaagtaccttgagcaaaacggcatc
gagccaatcgactggcgcttgcccgttctctga
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