Paracoccus aminovorans: JCM7685_1092
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Entry
JCM7685_1092 CDS
T05468
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pamn
Paracoccus aminovorans
Pathway
pamn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pamn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JCM7685_1092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pamn03400
]
JCM7685_1092
Enzymes [BR:
pamn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JCM7685_1092
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JCM7685_1092
DNA repair and recombination proteins [BR:
pamn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JCM7685_1092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
CQR85669
LinkDB
All DBs
Position
I:complement(1085372..1086214)
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AA seq
280 aa
AA seq
DB search
MPELPEVETVRRGLQPHLEGRVIARAEARRPDLRWPLPPDLVQVLTGARVVALHRRSKYI
LAELEDRGSLLLHLGMSGRMLIEAEPQGDFHRDAAILPRHDHVVFWNDLGTRITFNDARR
FGMVDLVAPGATHPLLAHLGPEPLGEGFTAEVLARALAGRRSPVKAALLDQRIVAGLGNI
YVSEALFRAGIDPRRPAGQVTAAEIAGLVGRIRAVLEEAIAAGGSSLRDHRQATGELGYF
QHSFRVYDREGAPCPNGCGGVVARIVQSGRSSYFCPLCQR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactgccagaagtcgaaaccgtccgccgtggccttcagccgcatctggaaggg
cgggtgatcgcccgggccgaggcccgccgcccggacctgcgctggccgctgccgcccgac
ctggtgcaggtgctgaccggagcgcgggtcgtcgccctgcaccggcgctcgaaatacatc
ctggccgagctggaggaccggggcagcctgctgctgcatctgggcatgtccgggcggatg
ctgatcgaggcggagccgcagggcgatttccaccgcgacgcggcgatcctgccgcgccac
gaccatgtcgtgttctggaacgatctgggcacgcgcatcaccttcaacgacgcccggcga
ttcggcatggtggacctggtggcgccgggggccacgcatccgctgctggcacatctgggg
cccgagccgctgggcgaaggtttcaccgccgaggtgctggcgcgggccctggccgggcgg
cgcagcccggtcaaggcagcgctgctggaccagcgaatcgtcgcgggcctgggcaatatc
tatgtctcggaggcgctgttccgggccggcatcgacccgcgccggccggccggacaggtg
acggcggccgagatcgcggggctggtcggccggatccgcgccgtgctggaggaggccatc
gcggcgggcggctcgtccctgcgcgaccaccgccaggcgacgggcgagctgggctatttc
cagcattcgttccgggtctatgaccgcgagggggcgccctgccccaacggctgcggcggc
gtggtggcgcggatcgtgcaatcgggacggtcgagctatttctgcccgctctgccagagg
tag
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