Podospora anserina: PODANSg5160
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Entry
PODANSg5160 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pan
Podospora anserina
Pathway
pan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PODANSg5160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pan03019
]
PODANSg5160
Messenger RNA biogenesis [BR:
pan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PODANSg5160
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PODANSg5160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
6192484
NCBI-ProteinID:
XP_001908125
UniProt:
B2AWM4
LinkDB
All DBs
Position
7
AA seq
554 aa
AA seq
DB search
MPPPNNMNRFQGGPNTMYHQQQYQTHAPQTSGHPPPLGGNPAYLNQLSAAGNPFGATSNL
MGLAGGMGAAAGGFNAETGLASHAARMGFHSGAMQQAQAQQQQVLQQQQQHLQAQQHGQH
PALHPAQHTPQQSHALEHTTRAAQNKGRIREVWKHNLEEEFEILRDLIQTHKYVAMDTEF
PGVVSRPMGGFRGKSDYHYQCLRTNVDMLSVIQIGIALFNEDGEQPTSVDPSSQWSNPRR
TGTQAPLPFAWQFNFKFSLEDDMYNETSIESLQHAGIDFKRMEQDGIDPFKFAALLIPSG
LVLEDDVYWISFHGGYDFGYLTKLLMPKNLPGDEGDFDEEMKRWFPATYDVKHLMKHAIK
LQNSGQLEVRDPGVVDILTKFEQKAGLEHIAETLKIKRVGSAHQAGSDSLLTGRVFFELR
KRIFNGHIPEEHLGKVWGLGVPDYSIGAQQFNSGQQQSTANKSNNADGSAANGATPSTPN
TNNVGLANNTTPAPASHQTNGVNNQSNSNNAAAGSSGGNAAQSVGGGMGPMTPGGGGGVF
GAFAFGGGNTNSAR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgccaaacaacatgaaccgctttcaaggcgggccgaacaccatgtaccatcag
cagcaatatcagacacacgcacctcaaacctcgggccacccaccgccactgggtggaaac
cctgcttatctcaaccaactgtctgccgctggcaatccttttggagcgaccagcaacctg
atgggccttgccggtggaatgggtgccgctgctggcggcttcaatgccgaaaccggcctc
gcaagccatgccgcgcgaatgggcttccatagcggggcaatgcagcaggcgcaagctcaa
cagcaacaggttctgcagcagcagcagcaacacctgcaggcacagcaacatggccaacac
cccgctctccatcctgcccaacacactccacaacaaagccatgccttggaacacacaacg
cgggcggcccagaacaagggaaggatacgggaggtgtggaagcacaatctggaggaggag
tttgagattctacgagatctgatacagacacataaatatgtggctatggacacggaattt
ccgggtgttgtatcgaggccaatgggcggatttagggggaaaagcgattaccattaccaa
tgcctgcggacaaacgtcgatatgctcagcgttattcagatcggaatcgcgcttttcaac
gaggatggtgaacaaccaacttctgtagacccatcgtcccaatggtcaaaccctaggagg
acaggcactcaagcgccactgcctttcgcctggcaattcaacttcaaattctctcttgag
gacgacatgtacaacgagacctcgattgaatcactccagcatgccggtatcgattttaag
cgaatggagcaggacggcatcgatcctttcaagttcgctgcgctcttgataccatctggc
ctggttcttgaggatgatgtatattggatcagctttcacggcggatatgacttcggttac
ctgaccaagctcttgatgcccaagaaccttcccggcgacgagggcgactttgacgaggag
atgaagaggtggtttcctgccacgtatgatgtgaagcacctgatgaagcatgccatcaag
cttcagaacagcggccagcttgaagtccgggaccctggtgtggtcgatattctgacaaag
ttcgagcagaaggccggcctcgaacacattgccgagacactcaagatcaagcgagtaggc
agcgcccaccaggctgggtcggacagcttgctcactgggcgagtattctttgagttgcga
aagcgcatcttcaacggccacattccggaagaacatctgggcaaagtgtggggattgggt
gtgccagactattccatcggtgcgcagcagttcaacagcgggcaacagcagtccacggcc
aacaagagcaacaatgccgatggctcagctgcgaatggtgctaccccaagcacgcccaac
acaaacaatgttggactagccaacaacaccacgccggccccagcatcccatcaaaccaat
ggtgtgaacaaccagtcaaacagtaacaatgctgctgccgggtcttctggcggaaatgcc
gcccagagcgtgggtggaggcatgggtccaatgacacctggagggggaggaggagtattt
ggggcgtttgcttttggtggcggaaataccaacagcgctagatag
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