KEGG   Podospora anserina: PODANSg5407
Entry
PODANSg5407       CDS       T01048                                 
Name
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pan  Podospora anserina
Pathway
pan03030  DNA replication
pan03410  Base excision repair
pan03420  Nucleotide excision repair
pan03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PODANSg5407
   03410 Base excision repair
    PODANSg5407
   03420 Nucleotide excision repair
    PODANSg5407
   03430 Mismatch repair
    PODANSg5407
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pan03032]
    PODANSg5407
   03400 DNA repair and recombination proteins [BR:pan03400]
    PODANSg5407
Enzymes [BR:pan01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PODANSg5407
    6.5.1.6  DNA ligase (ATP or NAD+)
     PODANSg5407
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     PODANSg5407
DNA replication proteins [BR:pan03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PODANSg5407
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PODANSg5407
DNA repair and recombination proteins [BR:pan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PODANSg5407
   NER (nucleotide excision repair)
    Other NER factors
     PODANSg5407
   MMR (mismatch excision repair)
    Other MMR factors
     PODANSg5407
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C AT_hook MctB
Other DBs
NCBI-GeneID: 6192108
NCBI-ProteinID: XP_001908372
UniProt: B2AXC1
LinkDB
Position
7
AA seq 957 aa
MPPKGSRQATLGKFFTQANGAAIPEPKVAAQNKTQTKLSFSTKVGGEQSPKRKKKDEEEE
VSSDAEGGEEGGKPVEKKKKRGRPAKAAIITTTEKKTRKKEVDEDGDESMEDAEPAQKKA
RKGRRRVVRDEEDGDESMEDAPAPVEDGRVSSPEGYQYEKGSEPRMLNATPKKRQGKKVR
QDEKEWNLGVESPEGYDYKGGSPPKLFKGDRLVAVGGKKVGKEEAGKKEGEKAGKKAVEK
EEEEVVKEGEETASSASDVEMEEEEEEEKPEVVKKARQKVQATLKSADEHPFPDWKAGEP
VPYAALCTTFSLVELTTKRLEIMAHCALFLRQVLRLTPDDLLPVVLLMINKLAPDYAGIE
LGIGESLIMKAIGESTGRSLAIIKQDQKEIGDLGLVAVKSRSTQPTMFKPKPLTVRGVLK
GLMGIATTTGNGAQGRKVDGIKKLLSQADANGAKKVDITKDKGGPSEAKYLVRFLEGKLR
LGLAEKSVIVSLSQAVVAHEAAQKGVAPSAADFEKGEAILKTVYSELPSYDVIIPAMVEH
GIMNLRDHCKLRPGVPLKPMLANPTKAITEVLDRFENKLFTCEYKYDGERAQIHYVAKDT
AEELSQSAANASKEVGNGVAAIFSRNSEDLSKKYPDVLAKLSTWVKDDTKSFVLDCESVA
WDVDEKKVLPFQQLMTRKKKDVKIEEVKVKVCVFAFDLLYLNGEAVVNKSLRERRELLHK
SFTPVEGEFAFATSMNGQELDEIQTFLDESVKASCEGLMVKMLDGEESGYEPSKRSRNWL
KKDYLAGIGDSLDLVVLGAYFGKGKRTSVYGAFLLACYNPGTDMYETVCNIGTGFSEAVL
EELHAQLSKITIDRPKPFYAHSSGGQHQPDVWFEPKYVWEVKTADLTLSPRYKAGMKEGV
DPTGEKGISLRFPRFIKVRDDKKPDEATSSRQVAEMYRKQESVSKSKGPSVDDDFEY
NT seq 2874 nt   +upstreamnt  +downstreamnt
atgcctcctaaggggagtaggcaggctacgctggggaaattcttcacccaggccaacggc
gctgcgattccggagccaaaggtggcggcgcaaaataaaacgcagacgaagttaagtttt
tcgaccaaggtggggggggagcagagccccaagaggaagaagaaggatgaagaggaggag
gtgagttccgatgctgaggggggagaggaggggggtaaaccggtggagaagaagaagaaa
cggggccggcctgctaaggctgccatcatcactacgacggaaaagaagacgagaaagaag
gaggttgatgaggatggggatgagagcatggaggatgcggaacctgcgcagaaaaaagcg
aggaaggggcggaggagggtggtgagggatgaggaggatggggatgagagtatggaggat
gcgccggcgccggttgaggatggcagggtgtcctcgccggaggggtatcagtatgagaag
gggagtgagccgaggatgttgaatgcgacgccgaagaagaggcagggaaagaaggtgaga
caggatgagaaggagtggaatttgggggtggagtcgccggaggggtatgattataagggt
gggagtccgccgaagctttttaagggggataggttggttgctgttggggggaagaaggtt
gggaaggaggaggcggggaagaaagagggggagaaggccgggaagaaggcggttgagaag
gaggaggaggaggttgtcaaggagggagaggagacggcgtcgtcggcttcggatgtggag
atggaggaggaggaggaggaggagaagccggaggtggtcaagaaggcgaggcagaaggtg
caggctacgcttaagagtgctgatgagcatccttttcctgattggaaggctggggagccg
gtgccgtatgctgctctctgcactacgttttcgctggtggagctcacgacgaagaggctg
gagattatggcgcactgtgcgctgtttttgagacaggttttgaggctcacgccggatgat
cttttgccggtggtgctgcttatgatcaacaagcttgctcctgactatgcgggtatcgag
ctgggcatcggagagagtttgatcatgaaggctatcggagagtcgacgggcagaagtctg
gcgattatcaagcaggatcagaaggagattggtgatctgggcttggtggcggtcaagagc
aggtcgacgcagccgaccatgttcaaaccaaagccattgactgttaggggtgtgctgaag
gggctgatgggcattgccacgacaacgggcaatggagctcaggggaggaaggtggatggg
atcaagaaactgctttcccaggctgatgccaacggggcgaagaaggttgatatcaccaag
gacaagggcgggccgagtgaagccaagtatctggtcaggttcctggaggggaagctgaga
ttgggtctggcggagaagtcggtcattgtcagtttgtcacaggcggtggttgcgcacgag
gcggctcaaaagggggttgcgcccagtgcggctgactttgagaagggcgaggcgatcctc
aagactgtctacagcgagctgccaagctacgatgtcatcattccggctatggttgagcac
gggatcatgaacctgagggatcactgcaagttgagacctggtgttcccctcaagcccatg
ttggccaatcctaccaaggctatcaccgaggttctggaccggtttgagaacaagcttttc
acttgcgagtacaagtacgatggtgaaagagcgcagattcactatgtggccaaggacact
gctgaagagctcagccagtcggccgcgaatgccagcaaggaggtgggtaatggtgtggcg
gcgatcttctcgagaaactcggaggatctgtccaagaagtaccctgacgtcttggccaag
ctgtctacttgggtcaaggacgacacgaagagctttgtcttggactgtgagtcggttgct
tgggatgtggatgagaagaaggtgttgcctttccagcagctgatgacgcgcaagaagaag
gacgtcaagattgaggaagtcaaggtcaaggtttgcgtctttgcgtttgatctgctttat
ctgaacggggaggcggtggtgaacaagtcgctcagggagaggagggagctgttgcacaag
tcgtttactcctgtcgagggcgagtttgcgtttgcgacgtcgatgaatgggcaggagctg
gatgagattcagacgttcttggatgagtcggtcaaggcttcgtgtgaggggttgatggtg
aagatgctggatggggaggagagtgggtatgagcctagtaagaggtcgaggaattggttg
aagaaagactacctcgccggcatcggcgactcgctcgacctcgtcgtcctcggtgcctac
tttggcaagggcaagcgcacctctgtctacggcgcctttttgctggcgtgctacaacccc
ggcacggacatgtacgaaacggtctgcaacattggcaccggcttcagcgaggctgtgctc
gaggagctgcatgcccagctctccaagatcacgattgatcgccccaagccgttttacgcc
cacagcagcgggggccagcaccagccggacgtgtggtttgaacctaaatatgtctgggag
gtcaagacggcggacttgacgctgagcccgaggtacaaggcggggatgaaggagggggtt
gacccgaccggggagaaggggatcagcttgaggtttccgaggtttatcaaggtgagggat
gacaagaagccggacgaggcgacgagcagtcggcaggtggcggagatgtatcggaagcag
gagagtgtgagtaagagcaaggggccgagtgtggatgatgattttgagtattag

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