Podospora anserina: PODANSg5608
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Entry
PODANSg5608 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pan
Podospora anserina
Pathway
pan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PODANSg5608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pan03041
]
PODANSg5608
Spliceosome [BR:
pan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PODANSg5608
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
PRP4
NBCH_WD40
WDR54
Nbas_N
Motif
Other DBs
NCBI-GeneID:
6192922
NCBI-ProteinID:
XP_001908573
UniProt:
B2AXX2
LinkDB
All DBs
Position
1
AA seq
546 aa
AA seq
DB search
MTRNQPKIQTKSIPTAVMMHPSRRAYVEEADTEDRGSGGIDIDAIPIDRDYDIPGAGAGI
APERASAIISQFERKRFAATIAVPTDDGRVRAKLRELGEPITLFGEGPVDRRDRLRELLT
EQAQQATGQESADVEMQDAGNDEEAEEQEEEFYSRGTQELLDARIEIAKFTIPRAKRRVE
FQKKEATIPLRTHVKFRKEIKERLQTFELQASQTAGDRHVSMTRFSPDGQMIATGNWGGQ
VKLIDIPTLEHRKTLRGHTNKISGLAWRPGATLPEANISEDTVNLASGGAEGQVHLWSLN
QDTPLSTLSGHSQRVCRVEFHPSGKYLASASEDTSWRLWDVETTTELLLQEGHSRGVYAV
SFNTDGSLLASAGLDSIGRIWDLRSGRTVMILDGHLDGHIKPIYGLDWSPDGHRVLTASA
DGWIKCWDVRKVQRTGGIGAHTSAVSDVRWFKGMDEPVDGKPPGEDDKGNQLPKKSGTFL
VSSGFDHKVNIFSADDWALAQSLSGHTGPVASVDVSRDGKWIISGGHDRTVKLWGRNDAT
GLYGDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggaaccagccaaaaatacaaacaaaatcaatacccaccgcagtcatgatgcac
ccatcacgtagggcgtatgttgaggaggctgacactgaggaccgaggaagtggaggcatt
gacatagatgccattccaatcgaccgcgactatgacatccccggagccggcgcaggcatt
gcgcccgagagagcatcagccatcatctcacaattcgagcgcaagcgattcgccgccact
atcgcggtcccaaccgacgatggacgtgtccgcgccaaacttcgagagctaggcgagcct
atcacgctgttcggcgaaggaccggtcgatcgacgcgacaggttacgagagcttcttacc
gagcaggcgcagcaggcgacaggccaggagagcgcagatgtggagatgcaggatgctggc
aacgacgaggaagcggaagagcaagaggaagagttttactctcgaggaacacaggagctt
ctcgatgcccgaatagaaatcgccaagtttacgatcccccgagcgaaacggcgcgtcgag
tttcagaagaaggaggctacgattcctctccgtacccatgtcaagtttaggaaggagatc
aaggagcggcttcagacgtttgaattgcaagccagtcagactgcgggagatcgtcatgtg
agcatgacgaggttttcgccagatggacagatgattgcgactggaaattggggcggtcaa
gtcaagcttatcgatataccgactttggagcatcgcaagacgctgcgaggacataccaac
aagatcagcggtttggcctggaggcctggtgctacccttcccgaggccaacatctcggag
gacacggtcaaccttgcttcgggtggtgcagagggccaggttcatctttggtcgctaaac
caagatacaccgctatcgacgctctctgggcactcgcaaagagtatgccgtgtcgagttt
cacccttctggaaaatacctcgcatctgcgtctgaggacacgtcgtggaggctgtgggat
gtcgaaacaacaaccgaactgcttcttcaagagggacactcgcggggagtgtacgccgta
agcttcaacaccgacgggtccttgctggccagtgcaggtctggacagtattggaagaatc
tgggatttgcggtcgggacggacagtcatgattctggacgggcatctggatggccacatc
aagccgatctacgggctggactggagtccggacgggcaccgagtcctcacggcctcggca
gatggatggatcaaatgctgggacgtgagaaaagtgcagaggacaggcggaattggtgcg
cacacaagcgcggtatcagatgtcagatggttcaaggggatggatgagcccgttgacggg
aagccaccaggcgaggacgacaagggaaaccagttgccaaagaagtctgggacgtttttg
gtgtcgtctgggtttgaccacaaggtcaacattttctcggctgatgactgggctcttgct
cagtcgctgagcggccatactggcccagtagcgagtgtcgatgtaagccgggacggcaag
tggatcatcagcggtggacatgatcggactgtcaagttatggggtcgtaatgatgcaacc
ggtctgtatggtgacttttag
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integrated database retrieval system