Pandoraea sp. XY-2: DRB87_09180
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Entry
DRB87_09180 CDS
T06086
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand00010
Glycolysis / Gluconeogenesis
pand00020
Citrate cycle (TCA cycle)
pand00260
Glycine, serine and threonine metabolism
pand00280
Valine, leucine and isoleucine degradation
pand00310
Lysine degradation
pand00380
Tryptophan metabolism
pand00620
Pyruvate metabolism
pand00630
Glyoxylate and dicarboxylate metabolism
pand00640
Propanoate metabolism
pand00785
Lipoic acid metabolism
pand01100
Metabolic pathways
pand01110
Biosynthesis of secondary metabolites
pand01120
Microbial metabolism in diverse environments
pand01200
Carbon metabolism
pand01210
2-Oxocarboxylic acid metabolism
pand01240
Biosynthesis of cofactors
Module
pand_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pand_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pand_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DRB87_09180 (lpdA)
00020 Citrate cycle (TCA cycle)
DRB87_09180 (lpdA)
00620 Pyruvate metabolism
DRB87_09180 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
DRB87_09180 (lpdA)
00640 Propanoate metabolism
DRB87_09180 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DRB87_09180 (lpdA)
00280 Valine, leucine and isoleucine degradation
DRB87_09180 (lpdA)
00310 Lysine degradation
DRB87_09180 (lpdA)
00380 Tryptophan metabolism
DRB87_09180 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DRB87_09180 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pand04147
]
DRB87_09180 (lpdA)
Enzymes [BR:
pand01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
DRB87_09180 (lpdA)
Exosome [BR:
pand04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
DRB87_09180 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
GIDA
NAD_binding_8
Pyr_redox_3
GCV_H
DAO
FAD_binding_2
AlaDh_PNT_C
Thi4
FAD_binding_3
Biotin_lipoyl_2
DEC-1_N
HI0933_like
3HCDH_N
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
QBC31497
LinkDB
All DBs
Position
2005221..2006999
Genome browser
AA seq
592 aa
AA seq
DB search
MSLIEVKVPDIGAEGVDVIEVMIKPGDKIARDASLITLESDKASMEVPSEVSGTVKEVKI
KVGDKASQGTLIALVEVDGAGAAKAEAPVAASAPAAPAAAAPAANPSAPTPAPAAAKHSG
GADTECDVLVLGAGPGGYSAAFRSADLGRKTVLIERYATLGGVCLNVGCIPSKALLHTAA
VLEEAQTLGHHGISFAKPEIDLDKLRAYKESVVGKLTGGLAGMAKMRKVEVVRGVGTFLD
PNHIEVVAEDGSKRTVKFAQAIIAAGSQAVKLPFLPEDPRIVDSTGALELRQLPKKMLVI
GGGIIGLEMATVYSALGTEIDVVEMLDGLMQGADRDLVKVWEKMNTKRFGRVMLKTKTVG
AEAKADGIYVKFEGEAAPAEPQRYDLVLVAVGRSPNGKKIGAENAGVAVGDRGFIDVDKQ
MRTNVPHIFAIGDIVGQPMLAHKAVHEAHVAAEAAAGEKAYFDAIQIPSVAYTDPEVAWA
GKTEDQLKAEGVKYGKAVFPWAASGRAIANGRDEGFTKVLFDEETHRIVGGAIVGTHAGD
LIGELCLAVEMGADAVDIGKTIHPHPTLAESVGMAAEIYEGVCTDVPPARKK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcatcgaagtcaaagtaccggacatcggcgcagagggcgtggatgtcatcgaa
gtgatgatcaagccgggcgacaagatcgccagggatgcatcgctcattacgcttgagtct
gacaaggcgtccatggaagtgccgtcggaagtgtcgggcacggtcaaggaagtgaagatc
aaggtgggcgacaaggccagtcaaggcacgctgatcgcgcttgtcgaagtggacggtgcc
ggtgccgccaaggccgaagccccggtggccgcctccgcgccggcagcgcctgccgccgcc
gcgcctgcggcaaatccgagcgccccgaccccggccccggctgcggccaagcacagcggc
ggtgccgacaccgagtgcgacgtgctcgtgttgggcgccggtccgggcggatactcggcg
gctttccgcagtgccgacctgggccgcaagaccgtgctcatcgagcgctatgcgaccctc
ggcggcgtgtgcctgaacgtcggttgcatcccgtcgaaggcgctgctccatacggcggcc
gttctcgaagaggcccagacgctcggtcatcacggcatttcgttcgcgaagcccgagatc
gatctcgacaagctgcgcgcctacaaggaaagcgtggtcggcaagctcacgggcggtttg
gccggcatggccaagatgcgcaaggtggaagtcgtgcgcggcgtcggcacgttcctcgat
ccgaatcacatcgaagtcgtcgctgaagacggcagcaaacgcaccgtaaagttcgcgcag
gccatcatcgccgcgggttcgcaggcggtgaagttgccgttcctgccggaagacccgcgc
attgtcgattcgaccggcgccctcgagttgcgtcaactgccgaagaagatgctcgtgatc
ggcggcggcatcatcggtctggaaatggcgacggtatatagcgccctgggcaccgagatc
gatgtcgtggaaatgctcgacggcctgatgcaaggcgccgaccgcgatctggtcaaggtc
tgggagaagatgaacacgaagcgcttcggccgcgtcatgctcaagaccaagaccgtgggt
gccgaggccaaggccgatggcatctacgtgaagttcgagggcgaggcggcaccggcggag
ccccagcgttacgacctcgtgctggtcgccgtgggccgcagcccgaacggcaagaagatc
ggcgccgagaatgcgggcgtcgccgtgggcgatcgcgggttcatcgatgtcgacaagcag
atgcggaccaacgtgccacacatcttcgcgatcggcgatatcgtcggtcagccgatgctg
gcccacaaggccgtgcatgaagcccacgtcgcggcggaagcggcggcaggcgagaaggct
tatttcgacgccatccagattccgtcggtggcctacaccgatccggaagtggcttgggcc
ggcaagacggaagaccagttgaaggccgaaggtgtgaagtacggcaaggccgtgttcccg
tgggcggcatcgggtcgcgcgatcgcgaacggccgtgacgaaggcttcaccaaggtgctg
ttcgatgaagaaacgcatcgcatcgttggcggtgccattgtcggcacgcacgccggcgat
ctgatcggcgaactttgcctggccgtcgagatgggcgcggatgccgtcgatatcgggaag
acgattcacccgcacccgacgctggccgaatcggtcggtatggcagcggagatttacgaa
ggtgtttgcaccgacgttccgccggctcgcaagaagtaa
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