KEGG   Pandoraea sp. XY-2: DRB87_09180
Entry
DRB87_09180       CDS       T06086                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pand  Pandoraea sp. XY-2
Pathway
pand00010  Glycolysis / Gluconeogenesis
pand00020  Citrate cycle (TCA cycle)
pand00260  Glycine, serine and threonine metabolism
pand00280  Valine, leucine and isoleucine degradation
pand00310  Lysine degradation
pand00380  Tryptophan metabolism
pand00620  Pyruvate metabolism
pand00630  Glyoxylate and dicarboxylate metabolism
pand00640  Propanoate metabolism
pand00785  Lipoic acid metabolism
pand01100  Metabolic pathways
pand01110  Biosynthesis of secondary metabolites
pand01120  Microbial metabolism in diverse environments
pand01200  Carbon metabolism
pand01210  2-Oxocarboxylic acid metabolism
pand01240  Biosynthesis of cofactors
Module
pand_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pand_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pand_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:pand00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DRB87_09180 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DRB87_09180 (lpdA)
   00620 Pyruvate metabolism
    DRB87_09180 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DRB87_09180 (lpdA)
   00640 Propanoate metabolism
    DRB87_09180 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DRB87_09180 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DRB87_09180 (lpdA)
   00310 Lysine degradation
    DRB87_09180 (lpdA)
   00380 Tryptophan metabolism
    DRB87_09180 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DRB87_09180 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pand04147]
    DRB87_09180 (lpdA)
Enzymes [BR:pand01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DRB87_09180 (lpdA)
Exosome [BR:pand04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DRB87_09180 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA NAD_binding_8 Pyr_redox_3 GCV_H DAO FAD_binding_2 AlaDh_PNT_C Thi4 FAD_binding_3 Biotin_lipoyl_2 DEC-1_N HI0933_like 3HCDH_N RnfC_N
Other DBs
NCBI-ProteinID: QBC31497
LinkDB
Position
2005221..2006999
AA seq 592 aa
MSLIEVKVPDIGAEGVDVIEVMIKPGDKIARDASLITLESDKASMEVPSEVSGTVKEVKI
KVGDKASQGTLIALVEVDGAGAAKAEAPVAASAPAAPAAAAPAANPSAPTPAPAAAKHSG
GADTECDVLVLGAGPGGYSAAFRSADLGRKTVLIERYATLGGVCLNVGCIPSKALLHTAA
VLEEAQTLGHHGISFAKPEIDLDKLRAYKESVVGKLTGGLAGMAKMRKVEVVRGVGTFLD
PNHIEVVAEDGSKRTVKFAQAIIAAGSQAVKLPFLPEDPRIVDSTGALELRQLPKKMLVI
GGGIIGLEMATVYSALGTEIDVVEMLDGLMQGADRDLVKVWEKMNTKRFGRVMLKTKTVG
AEAKADGIYVKFEGEAAPAEPQRYDLVLVAVGRSPNGKKIGAENAGVAVGDRGFIDVDKQ
MRTNVPHIFAIGDIVGQPMLAHKAVHEAHVAAEAAAGEKAYFDAIQIPSVAYTDPEVAWA
GKTEDQLKAEGVKYGKAVFPWAASGRAIANGRDEGFTKVLFDEETHRIVGGAIVGTHAGD
LIGELCLAVEMGADAVDIGKTIHPHPTLAESVGMAAEIYEGVCTDVPPARKK
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgagtctcatcgaagtcaaagtaccggacatcggcgcagagggcgtggatgtcatcgaa
gtgatgatcaagccgggcgacaagatcgccagggatgcatcgctcattacgcttgagtct
gacaaggcgtccatggaagtgccgtcggaagtgtcgggcacggtcaaggaagtgaagatc
aaggtgggcgacaaggccagtcaaggcacgctgatcgcgcttgtcgaagtggacggtgcc
ggtgccgccaaggccgaagccccggtggccgcctccgcgccggcagcgcctgccgccgcc
gcgcctgcggcaaatccgagcgccccgaccccggccccggctgcggccaagcacagcggc
ggtgccgacaccgagtgcgacgtgctcgtgttgggcgccggtccgggcggatactcggcg
gctttccgcagtgccgacctgggccgcaagaccgtgctcatcgagcgctatgcgaccctc
ggcggcgtgtgcctgaacgtcggttgcatcccgtcgaaggcgctgctccatacggcggcc
gttctcgaagaggcccagacgctcggtcatcacggcatttcgttcgcgaagcccgagatc
gatctcgacaagctgcgcgcctacaaggaaagcgtggtcggcaagctcacgggcggtttg
gccggcatggccaagatgcgcaaggtggaagtcgtgcgcggcgtcggcacgttcctcgat
ccgaatcacatcgaagtcgtcgctgaagacggcagcaaacgcaccgtaaagttcgcgcag
gccatcatcgccgcgggttcgcaggcggtgaagttgccgttcctgccggaagacccgcgc
attgtcgattcgaccggcgccctcgagttgcgtcaactgccgaagaagatgctcgtgatc
ggcggcggcatcatcggtctggaaatggcgacggtatatagcgccctgggcaccgagatc
gatgtcgtggaaatgctcgacggcctgatgcaaggcgccgaccgcgatctggtcaaggtc
tgggagaagatgaacacgaagcgcttcggccgcgtcatgctcaagaccaagaccgtgggt
gccgaggccaaggccgatggcatctacgtgaagttcgagggcgaggcggcaccggcggag
ccccagcgttacgacctcgtgctggtcgccgtgggccgcagcccgaacggcaagaagatc
ggcgccgagaatgcgggcgtcgccgtgggcgatcgcgggttcatcgatgtcgacaagcag
atgcggaccaacgtgccacacatcttcgcgatcggcgatatcgtcggtcagccgatgctg
gcccacaaggccgtgcatgaagcccacgtcgcggcggaagcggcggcaggcgagaaggct
tatttcgacgccatccagattccgtcggtggcctacaccgatccggaagtggcttgggcc
ggcaagacggaagaccagttgaaggccgaaggtgtgaagtacggcaaggccgtgttcccg
tgggcggcatcgggtcgcgcgatcgcgaacggccgtgacgaaggcttcaccaaggtgctg
ttcgatgaagaaacgcatcgcatcgttggcggtgccattgtcggcacgcacgccggcgat
ctgatcggcgaactttgcctggccgtcgagatgggcgcggatgccgtcgatatcgggaag
acgattcacccgcacccgacgctggccgaatcggtcggtatggcagcggagatttacgaa
ggtgtttgcaccgacgttccgccggctcgcaagaagtaa

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