Pandoraea sp. XY-2: DRB87_13280
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Entry
DRB87_13280 CDS
T06086
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand00010
Glycolysis / Gluconeogenesis
pand00020
Citrate cycle (TCA cycle)
pand00260
Glycine, serine and threonine metabolism
pand00280
Valine, leucine and isoleucine degradation
pand00310
Lysine degradation
pand00380
Tryptophan metabolism
pand00620
Pyruvate metabolism
pand00630
Glyoxylate and dicarboxylate metabolism
pand00640
Propanoate metabolism
pand00785
Lipoic acid metabolism
pand01100
Metabolic pathways
pand01110
Biosynthesis of secondary metabolites
pand01120
Microbial metabolism in diverse environments
pand01200
Carbon metabolism
pand01210
2-Oxocarboxylic acid metabolism
pand01240
Biosynthesis of cofactors
Module
pand_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pand_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pand_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DRB87_13280 (lpdA)
00020 Citrate cycle (TCA cycle)
DRB87_13280 (lpdA)
00620 Pyruvate metabolism
DRB87_13280 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
DRB87_13280 (lpdA)
00640 Propanoate metabolism
DRB87_13280 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DRB87_13280 (lpdA)
00280 Valine, leucine and isoleucine degradation
DRB87_13280 (lpdA)
00310 Lysine degradation
DRB87_13280 (lpdA)
00380 Tryptophan metabolism
DRB87_13280 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DRB87_13280 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pand04147
]
DRB87_13280 (lpdA)
Enzymes [BR:
pand01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
DRB87_13280 (lpdA)
Exosome [BR:
pand04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
DRB87_13280 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
HI0933_like
GIDA
FAD_oxidored
NAD_binding_8
FAD_binding_3
AlaDh_PNT_C
3HCDH_N
DAO
Thi4
2-Hacid_dh_C
XdhC_C
Lycopene_cycl
Agglutinin_C
Motif
Other DBs
NCBI-ProteinID:
QBC32137
LinkDB
All DBs
Position
complement(2932882..2934309)
Genome browser
AA seq
475 aa
AA seq
DB search
MAKEFDVVVIGAGPGGYIAAIRAAQLGFSVACVEKWTNPAGKMVLGGTCLNVGCIPSKAL
LASSEEFEKIGHHLADHGITTSDVKIDIEKMLSRKQGIVDKMTGGIEYLFKKNKITWLKG
HGTIIAKNDGGYQIDVKGAEAESVTAKNIIIATGSKARHLPGMPVDNKLISDNEGALSFD
TVPKKLGVIGAGVIGLELGSVWRRLGAEVTVLEAMPEFLAAADAGVAKEAAKQFKKQGLD
INVGVKVGEVKTGKNNVTISYTDKDGNAKTLDVDRLIVSVGRVPNTDDLGLGNIGLATDE
RGFIPVDDHCRTKLPNVYAIGDVVRGPMLAHKAEDEGVLVAEVIAGQKPHIDYNCIPWVI
YTSPEIAWVGKTEQQLKAEGREFKPGQFPFAANGRALGMGSSDGFVKVLADAKTDEILGV
HVIGLNASDLIAEAVVAMEFKAASEDIGRICHPHPSLSEVMREAALDVEKRALNK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaatttgatgtagtcgtaatcggcgccggccccggtggttatattgccgcc
atccgcgccgcccaactcggtttctcggtcgcttgcgtcgagaaatggaccaacccggcc
ggcaagatggtgctcggcgggacctgcctgaacgtcggatgcattccgtcgaaggcgctg
ctcgcctcgtcggaagagttcgagaagatcggtcatcacctggccgatcacggtatcacc
acgtcggacgtcaagatcgacatcgagaagatgctctcgcgcaagcagggtatcgtcgac
aagatgacgggcggtatcgaatatctgttcaagaagaacaagatcacgtggctcaagggt
cacggcacgatcattgccaagaacgacggcggctatcagatcgatgtgaagggtgccgag
gccgagtccgtcacggccaagaacatcatcatcgctaccggttcgaaggcgcgtcatctg
ccgggcatgccggtcgacaacaagctcatctcggataacgaaggtgcgctctcgttcgac
accgtgccgaagaagctgggcgtgatcggcgccggcgtgatcggtctggaactgggttcg
gtatggcgccgtctgggtgccgaagtcaccgtgctcgaagccatgccggaattcctggcg
gcggccgatgccggcgttgcgaaggaagcggccaagcagttcaagaagcaggggctggac
atcaacgtcggcgtgaaggtcggcgaggtcaagaccggcaagaacaacgtcacgatcagc
tacacggacaaggacggcaacgccaagacgctcgacgtcgatcgtctgatcgtgtcggtc
ggccgcgtgccgaacaccgatgacctgggcctgggcaacatcggtctggcgaccgacgag
cgcggcttcattccggtggacgaccactgccgtaccaagctgccgaacgtgtacgcgatc
ggcgacgtggtgcgtggcccgatgctcgcgcacaaggccgaagacgaaggcgtgctggtg
gcggaagtcatcgcgggccagaagccgcacatcgattacaactgcattccgtgggtgatc
tacacctccccggaaattgcctgggtcggcaagaccgagcagcaattgaaggccgaaggc
cgtgagttcaagccgggtcagttcccgttcgcggccaacggccgtgcgctgggcatgggc
tcgtcggacggtttcgtgaaggtgctggccgatgccaagaccgacgagatcctcggcgtg
cacgtgatcggcctgaacgcttcggacctgatcgccgaagccgtggtggcgatggaattc
aaggcggcgtcggaagacatcggccgtatctgccatccgcacccgtcgctgtcggaagtg
atgcgtgaagccgccctcgatgtcgagaagcgcgcgctgaacaagtaa
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