Pantoea sp. PSNIH2: PSNIH2_10685
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Entry
PSNIH2_10685 CDS
T03514
Name
(GenBank) LuxR family transcriptional regulator
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
panp
Pantoea sp. PSNIH2
Pathway
panp02020
Two-component system
panp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSNIH2_10685
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSNIH2_10685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
panp03000
]
PSNIH2_10685
Transcription factors [BR:
panp03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
PSNIH2_10685
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
HTH_20
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AIX74196
LinkDB
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Position
complement(2305271..2305993)
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AA seq
240 aa
AA seq
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MTFDDYFAWRREVEAQFFLLNNTKELTKALQQRIEALGLDHFALFIRHPVPFTRPKTFLF
TTYPPCWIKRYENENYYAVDPILQECSLPGKFIAWGDAVSDKNEIFWREAKAYGLTSGFS
CSLMASNRATGILSVVSKKALNMSHMLPEQQLRLQYLLDLSLQSLLRLDDVSMRILDITL
SSRELEILKWTAEGKTAAEISLILSISPYTVNFHQKNLQKRFNAPNKTQVASYAAAIGLL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcgatgattactttgcctggcgcagggaggtcgaggctcagttttttttactg
aataacacgaaagagttaacaaaagcgttgcaacagcggattgaagcgctggggctggat
cactttgccttatttattcgccatccagtaccttttacccggcctaaaacctttcttttc
accacatacccaccttgctggataaagcgatacgaaaatgaaaactattatgccgtcgat
cctattttgcaggagtgttcactgccgggaaaatttatagcctggggggatgccgtttcg
gataagaatgaaatattctggcgtgaggcaaaagcgtacggattgacatcaggcttctct
tgttcgctgatggcgtccaatcgcgcaacgggtatattatcggtagtatccaaaaaagcg
ttaaatatgtcgcatatgttgccggaacagcagttaagactacagtatctattggacctg
tctttgcaatcgttactgcgcttagatgatgtatccatgcggattctagatataacctta
agttcgcgtgaactggaaattttaaaatggacagcggaagggaaaacggcagccgagatt
tcattgatactttctatctcgccttacacggttaacttccatcagaagaatttacaaaag
cggtttaatgcgccaaataaaacccaggttgccagctatgcggccgccattggcttgctg
taa
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