Pseudomonas antarctica: A7J50_3821
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Entry
A7J50_3821 CDS
T04830
Name
(GenBank) Integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
panr
Pseudomonas antarctica
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
panr03032
]
A7J50_3821
03036 Chromosome and associated proteins [BR:
panr03036
]
A7J50_3821
03400 DNA repair and recombination proteins [BR:
panr03400
]
A7J50_3821
DNA replication proteins [BR:
panr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A7J50_3821
Chromosome and associated proteins [BR:
panr03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
A7J50_3821
DNA repair and recombination proteins [BR:
panr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
A7J50_3821
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Meth_synt_1
SNF5
Motif
Other DBs
NCBI-ProteinID:
ANF87194
UniProt:
A0A172Z418
LinkDB
All DBs
Position
complement(4235184..4235486)
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AA seq
100 aa
AA seq
DB search
MGALTKAEMAERLYEELGLNKREAKELVELFFEEIRHALEDNEQVKLSGFGNFDLRDKRQ
RPGRNPKTGEEIPITARRVVTFRPGQKLKARVEAYAGTKS
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgggggctttgacgaaagctgagatggcggaacgtctgtacgaagagttgggtctgaac
aagcgcgaggccaaggaattggtcgagctgttttttgaagaaatcaggcacgctctggaa
gacaacgaacaggtcaaattgtccggtttcggcaattttgacctgcgggacaaacgccag
cggcctggccgcaatccaaaaacgggagaagaaatcccgatcacggctcgccgtgtggtc
acctttcgtccagggcagaagttgaaggcccgagttgaggcttatgctggaaccaagtca
taa
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